KEGG   PATHWAY: sln00010
Entry
sln00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Staphylococcus lugdunensis N920143
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
sln00010  Glycolysis / Gluconeogenesis
sln00010

Module
sln_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:sln00010]
sln_M00002  Glycolysis, core module involving three-carbon compounds [PATH:sln00010]
sln_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:sln00010]
sln_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sln00010]
Other DBs
GO: 0006096 0006094
Organism
Staphylococcus lugdunensis N920143 [GN:sln]
Gene
SLUG_00750  ldh2; L-lactate dehydrogenase 2 [KO:K00016] [EC:1.1.1.27]
SLUG_01600  glcA; glucose-specific PTS transporter protein, IIABC component [KO:K20118] [EC:2.7.1.199]
SLUG_02170  [KO:K02791] [EC:2.7.1.199 2.7.1.208]
SLUG_02280  [KO:K00382] [EC:1.8.1.4]
SLUG_02310  [KO:K00627] [EC:2.3.1.12]
SLUG_03710  [KO:K01895] [EC:6.2.1.1]
SLUG_03720  [KO:K01006] [EC:2.7.9.1]
SLUG_03770  bglA; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
SLUG_03830  fda; fructose-bisphosphate aldolase class I [KO:K01623] [EC:4.1.2.13]
SLUG_04550  [KO:K00016] [EC:1.1.1.27]
SLUG_04770  [KO:K00128] [EC:1.2.1.3]
SLUG_04900  [KO:K04041] [EC:3.1.3.11]
SLUG_05090  [KO:K01835] [EC:5.4.2.2]
SLUG_05120  [KO:K00382] [EC:1.8.1.4]
SLUG_05760  [KO:K01834] [EC:5.4.2.11]
SLUG_06940  [KO:K01785] [EC:5.1.3.3]
SLUG_09420  [KO:K01624] [EC:4.1.2.13]
SLUG_09450  [KO:K00128] [EC:1.2.1.3]
SLUG_11460  pckA; phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
SLUG_11970  acsA; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
SLUG_12290  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
SLUG_12300  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
SLUG_12390  gap2; glyceraldehyde 3-phosphate dehydrogenase 2 [KO:K00150] [EC:1.2.1.59]
SLUG_13640  glkA; glucokinase [KO:K25026]
SLUG_13940  bfmBC; putative dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
SLUG_15120  [KO:K02777] [EC:2.7.1.-]
SLUG_16060  [KO:K00175] [EC:1.2.7.3 1.2.7.11]
SLUG_16070  [KO:K00174] [EC:1.2.7.3 1.2.7.11]
SLUG_17740  pdhD; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
SLUG_17750  pdhC; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
SLUG_17760  pdhB; putative pyruvate dehydrogenase E1 component,beta subunit [KO:K00162] [EC:1.2.4.1]
SLUG_17770  pdhA; putative pyruvate dehydrogenase E1 component,alpha subunit [KO:K00161] [EC:1.2.4.1]
SLUG_18890  [KO:K01810] [EC:5.3.1.9]
SLUG_20230  eno; putative enolase [KO:K01689] [EC:4.2.1.11]
SLUG_20240  pgm; putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
SLUG_20250  tpiA; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
SLUG_20260  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
SLUG_20270  gap1; glyceraldehyde 3-phosphate dehydrogenase 1 [KO:K00134] [EC:1.2.1.12]
SLUG_21990  adhA; alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
SLUG_23800  [KO:K01834] [EC:5.4.2.11]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
sln00020  Citrate cycle (TCA cycle)
sln00030  Pentose phosphate pathway
sln00500  Starch and sucrose metabolism
sln00620  Pyruvate metabolism
sln00640  Propanoate metabolism
sln00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

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