KEGG   PATHWAY: smel00010
Entry
smel00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Sinorhizobium meliloti 2011
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
smel00010  Glycolysis / Gluconeogenesis
smel00010

Module
smel_M00002  Glycolysis, core module involving three-carbon compounds [PATH:smel00010]
smel_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:smel00010]
smel_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:smel00010]
Other DBs
GO: 0006096 0006094
Organism
Sinorhizobium meliloti 2011 [GN:smel]
Gene
SM2011_c02835  glk; putative glucokinase transmembrane protein [KO:K00845] [EC:2.7.1.2]
SM2011_c02163  pgi; putative glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
SM2011_b20857  pgiA2; Putative glucose-6-phosphate isomerase [KO:K06859] [EC:5.3.1.9]
SM2011_c02042  pgiA1; Putative glucose-6-phosphate isomerase 1 [KO:K06859] [EC:5.3.1.9]
SM2011_c01852  pfp; putative pyrophosphate--fructose 6-phosphate 1-phosphotransferase [KO:K00895] [EC:2.7.1.90]
SM2011_b20202  cbbF; Putative D-fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
SM2011_c03983  fbaB; putative fructose-bisphosphate aldolase class I [KO:K01623] [EC:4.1.2.13]
SM2011_b21192  cbbA2; Putative fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
SM2011_b20199  cbbA; Putative fructose-1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
SM2011_c01023  tpiA; Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
SM2011_c03979  gap; putative glyceraldehyde 3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
SM2011_c03981  pgk; putative phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
SM2011_c02838  gpmA; putative phosphoglycerate mutase 1 protein [KO:K01834] [EC:5.4.2.11]
SM2011_c01028  eno; putative enolase [KO:K01689] [EC:4.2.1.11]
SM2011_c04005  pykA; putative pyruvate kinase II [KO:K00873] [EC:2.7.1.40]
SM2011_c00025  ppdK; Putative pyruvate phosphate dikinase [KO:K01006] [EC:2.7.9.1]
SM2011_c01030  pdhA; Pyruvate dehydrogenase E1 component alpha subunit [KO:K00161] [EC:1.2.4.1]
SM2011_c01031  pdhB; Pyruvate dehydrogenase E1 component beta subunit [KO:K00162] [EC:1.2.4.1]
SM2011_c01032  pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
SM2011_c01035  lpdA1; putative dihydrolipoamide dehydrogenase (E3 component of pyruvate dehydrogenase complex) protein [KO:K00382] [EC:1.8.1.4]
SM2011_c03204  lpdA3; putative dihydrolipoamide dehydrogenase (E3 component of branched-chain alpha-keto acid dehydrogenase complex) protein [KO:K00382] [EC:1.8.1.4]
SM2011_c02487  lpdA2; putative dihydrolipoamide dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) transmembrane protein [KO:K00382] [EC:1.8.1.4]
SM2011_c01270  adhC1; putative alcohol dehydrogenase class III + glutathione-dependent formaldehyde dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
SM2011_a2113  adhC2; AdhC2 glutathione-dependent dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
SM2011_b20170  putative S-(hydroxymethyl)glutathione dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
SM2011_a1296  adhA1; Alcohol dehydrogenase,Zn-dependent class III [KO:K13953] [EC:1.1.1.1]
SM2011_c00105  putative alcohol dehydrogenase [KO:K00001] [EC:1.1.1.1]
SM2011_c00680  NADP-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
SM2011_b21301  Aldehyde dehydrogenase (NAD+) [KO:K00128] [EC:1.2.1.3]
SM2011_c01971  puuC; Putative gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
SM2011_a1844  aldehyde dehydrogenase,NAD(P)-dependent [KO:K00128] [EC:1.2.1.3]
SM2011_c02689  putative aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
SM2011_c00741  acsA3; Putative acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
SM2011_c04093  acsA1; putative acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
SM2011_c03798  galM; putative aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
SM2011_a0077  hypothetical protein [KO:K01785] [EC:5.1.3.3]
SM2011_c03925  pgm; putative phosphoglucomutase (glucose phosphomutase) [KO:K01835] [EC:5.4.2.2]
SM2011_b21081  manB; Phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
SM2011_c02562  pckA; Phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
smel00020  Citrate cycle (TCA cycle)
smel00030  Pentose phosphate pathway
smel00500  Starch and sucrose metabolism
smel00620  Pyruvate metabolism
smel00640  Propanoate metabolism
smel00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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