KEGG   PATHWAY: spsd00010
Entry
spsd00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Staphylococcus shinii
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
spsd00010  Glycolysis / Gluconeogenesis
spsd00010

Module
spsd_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:spsd00010]
spsd_M00002  Glycolysis, core module involving three-carbon compounds [PATH:spsd00010]
spsd_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:spsd00010]
spsd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:spsd00010]
Other DBs
GO: 0006096 0006094
Organism
Staphylococcus shinii [GN:spsd]
Gene
JMB28_06950  ROK family glucokinase [KO:K25026] [EC:2.7.1.2]
JMB28_09840  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
JMB28_06260  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
JMB28_02605  fructose-bisphosphatase class III [KO:K04041] [EC:3.1.3.11]
JMB28_01665  fructose bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
JMB28_04510  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
JMB28_10485  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
JMB28_10495  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
JMB28_06310  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00150] [EC:1.2.1.59]
JMB28_10490  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
JMB28_12910  histidine phosphatase family protein [KO:K01834] [EC:5.4.2.11]
JMB28_03035  2,3-diphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
JMB28_10480  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
JMB28_10475  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
JMB28_06265  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
JMB28_01595  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
JMB28_09215  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
JMB28_09210  alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
JMB28_09205  2-oxo acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
JMB28_07100  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
JMB28_09200  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
JMB28_08280  2-oxoacid:acceptor oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
JMB28_08275  2-oxoacid:ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
JMB28_01890  lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
JMB28_05930  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
JMB28_13660  alcohol dehydrogenase catalytic domain-containing protein [KO:K00121] [EC:1.1.1.284 1.1.1.1]
JMB28_13225  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
JMB28_04525  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
JMB28_09565  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
JMB28_01400  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
JMB28_13245  acyl--CoA ligase [KO:K01895] [EC:6.2.1.1]
JMB28_06075  acsA; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
JMB28_03505  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
JMB28_09410  phospho-sugar mutase [KO:K01835] [EC:5.4.2.2]
JMB28_05820  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
JMB28_03105  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
JMB28_07505  PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
JMB28_01790  PTS transporter subunit EIIC [KO:K02791] [EC:2.7.1.199 2.7.1.208]
JMB28_02330  PTS transporter subunit IIABC [KO:K20118] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
spsd00020  Citrate cycle (TCA cycle)
spsd00030  Pentose phosphate pathway
spsd00500  Starch and sucrose metabolism
spsd00620  Pyruvate metabolism
spsd00640  Propanoate metabolism
spsd00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

DBGET integrated database retrieval system