KEGG   PATHWAY: syq00010
Entry
syq00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Synechocystis sp. PCC 6803 PCC-P
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
syq00010  Glycolysis / Gluconeogenesis
syq00010

Module
syq_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:syq00010]
syq_M00002  Glycolysis, core module involving three-carbon compounds [PATH:syq00010]
syq_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:syq00010]
Other DBs
GO: 0006096 0006094
Organism
Synechocystis sp. PCC 6803 PCC-P [GN:syq]
Gene
SYNPCCP_2647  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
SYNPCCP_2066  xylR; xylose repressor [KO:K25026] [EC:2.7.1.2]
SYNPCCP_1592  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
SYNPCCP_0269  pfkA; phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
SYNPCCP_2805  pfkA; phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
SYNPCCP_1843  fbp; fructose 1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
SYNPCCP_1411  glpX; fructose 1,6-bisphosphatase II [KO:K11532] [EC:3.1.3.11 3.1.3.37]
SYNPCCP_1828  fda; fructose-bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
SYNPCCP_2217  fbaA; fructose-1,6-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
SYNPCCP_2178  tpi; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
SYNPCCP_1034  gap1; glyceraldehyde 3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
SYNPCCP_2927  gap2; glyceraldehyde-3-phosphate dehydrogenase (NADP+)(phosphorylating) [KO:K00150] [EC:1.2.1.59]
SYNPCCP_1948  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
SYNPCCP_2038  yibO; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
SYNPCCP_3041  eno; enolase [KO:K01689] [EC:4.2.1.11]
SYNPCCP_0999  pykF; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
SYNPCCP_2657  pykF; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
SYNPCCP_2703  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
SYNPCCP_2019  slr1934; pyruvate dehydrogenase E1 component, alphasubunit [KO:K00161] [EC:1.2.4.1]
SYNPCCP_0870  pdhB; pyruvate dehydrogenase E1 beta subunit [KO:K00162] [EC:1.2.4.1]
SYNPCCP_2041  odhB; dihydrolipoamide acetyltransferase component(E2) of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
SYNPCCP_0179  phdD; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
SYNPCCP_2809  nifJ; pyruvate oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
SYNPCCP_0589  sll0990; glutathione-dependent formaldehyde dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
SYNPCCP_1827  slr0942; aldehyde reductase [KO:K00002] [EC:1.1.1.2]
SYNPCCP_3132  slr1192; zinc-containing alcohol dehydrogenase family [KO:K12957] [EC:1.1.1.2 1.1.1.183]
SYNPCCP_2600  slr0091; aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
SYNPCCP_2534  acs; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
SYNPCCP_3051  pgm; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
syq00020  Citrate cycle (TCA cycle)
syq00030  Pentose phosphate pathway
syq00500  Starch and sucrose metabolism
syq00620  Pyruvate metabolism
syq00640  Propanoate metabolism
syq00710  Carbon fixation in photosynthetic organisms
KO pathway
ko00010   
LinkDB

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