KEGG   PATHWAY: taa00970
Entry
taa00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Candidatus Nitrosocosmicus oleophilus
Class
Genetic Information Processing; Translation
Pathway map
taa00970  Aminoacyl-tRNA biosynthesis
taa00970

Organism
Candidatus Nitrosocosmicus oleophilus [GN:taa]
Gene
NMY3_00387  [KO:K14229]
NMY3_00446  valS; Valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
NMY3_00473  [KO:K14232]
NMY3_00560  [KO:K14232]
NMY3_00572  [KO:K14237]
NMY3_00605  [KO:K14234]
NMY3_00793  ansA; L-asparaginase 1 [KO:K09482] [EC:6.3.5.7]
NMY3_00794  gatB_1; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [KO:K03330] [EC:6.3.5.7]
NMY3_00940  hisS; Histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
NMY3_00957  [KO:K14223]
NMY3_00962  [KO:K14232]
NMY3_01235  [KO:K14219]
NMY3_01417  proS; Proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
NMY3_01478  [KO:K14229]
NMY3_02035  glyQS; Glycine--tRNA ligase [KO:K01880] [EC:6.1.1.14]
NMY3_02050  [KO:K14218]
NMY3_02126  [KO:K14228]
NMY3_02135  glnS; Glutamine--tRNA ligase [KO:K01885] [EC:6.1.1.17]
NMY3_02202  cysS_1; Cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
NMY3_02240  [KO:K14237]
NMY3_02331  [KO:K14234]
NMY3_02341  argS; Arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
NMY3_02456  [KO:K14219]
NMY3_02464  thrS; Threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
NMY3_02487  [KO:K14219]
NMY3_02514  [KO:K14230]
NMY3_02524  cysS_2; Cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
NMY3_02526  metG_1; Methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
NMY3_02549  lysS; Lysine--tRNA ligase [KO:K04566] [EC:6.1.1.6]
NMY3_02624  leuS; Leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
NMY3_02648  gatB_2; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
NMY3_02649  gatA_1; Glutamyl-tRNA(Gln) amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
NMY3_02651  asnS_1; Asparagine--tRNA ligase [KO:K09759] [EC:6.1.1.23]
NMY3_02654  alaS; Alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
NMY3_02665  [KO:K14233]
NMY3_02827  [KO:K14230]
NMY3_02938  [KO:K14225]
NMY3_02946  ileS; Isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
NMY3_02957  [KO:K14227]
NMY3_02999  pheT; Phenylalanine--tRNA ligase beta subunit [KO:K01890] [EC:6.1.1.20]
NMY3_03000  pheS; Phenylalanine--tRNA ligase alpha subunit [KO:K01889] [EC:6.1.1.20]
NMY3_03001  trpS; Tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
NMY3_03102  [KO:K14218]
NMY3_03112  asnS_2; Asparagine--tRNA ligase [KO:K09759] [EC:6.1.1.23]
NMY3_03156  [KO:K14218]
NMY3_03242  gatA_2; Glutamyl-tRNA(Gln) amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
NMY3_03285  [KO:K14234]
NMY3_03331  [KO:K14222]
NMY3_03450  [KO:K14237]
NMY3_03512  [KO:K01866] [EC:6.1.1.1]
NMY3_03540  asnS_3; Asparagine--tRNA ligase [KO:K01893] [EC:6.1.1.22]
NMY3_03550  serS; Serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
NMY3_03708  [KO:K14225]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
taa00250  Alanine, aspartate and glutamate metabolism
taa00260  Glycine, serine and threonine metabolism
taa00270  Cysteine and methionine metabolism
taa00290  Valine, leucine and isoleucine biosynthesis
taa00300  Lysine biosynthesis
taa00330  Arginine and proline metabolism
taa00340  Histidine metabolism
taa00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

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