KEGG   PATHWAY: twh00970
Entry
twh00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Tropheryma whipplei Twist
Class
Genetic Information Processing; Translation
Pathway map
twh00970  Aminoacyl-tRNA biosynthesis
twh00970

Organism
Tropheryma whipplei Twist [GN:twh]
Gene
TWT_062  lysS; lysyl-tRNA synthetase [KO:K04566] [EC:6.1.1.6]
TWT_167  pheS; phenylalanyl-tRNA synthetase alpha chain [KO:K01889] [EC:6.1.1.20]
TWT_168  pheT; phenylalanyl-tRNA synthetase beta chain [KO:K01890] [EC:6.1.1.20]
TWT_169  tyrS; tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
TWT_183  proS; prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
TWT_209  gltS; glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
TWT_262  thrS; threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
TWT_316  cysS2; cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
TWT_347  cysS1; cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
TWT_351  argS; arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
TWT_358  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
TWT_376  alaS; alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
TWT_385  leuS; leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
TWT_411  gatB; glutamyl-tRNA(Gln) amidotransferase subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
TWT_412  gatA; glutamyl-tRNA(Gln) amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
TWT_413  gatC; glutamyl-tRNA(Gln) amidotransferase subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
TWT_477  ileS; isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
TWT_478  valS; valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
TWT_500  glyQS; glycyl-tRNA synthetase alpha chain and beta chain [KO:K14164] [EC:6.1.1.14]
TWT_686  trpS; tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
TWT_726  serS; seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
TWT_763  metS; methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
TWT_785  hisS; histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
TWT_RNA01  [KO:K14227]
TWT_RNA02  [KO:K14218]
TWT_RNA03  [KO:K14230]
TWT_RNA04  [KO:K14234]
TWT_RNA05  [KO:K14236]
TWT_RNA06  [KO:K14232]
TWT_RNA07  [KO:K14233]
TWT_RNA08  [KO:K14231]
TWT_RNA09  [KO:K14221]
TWT_RNA10  [KO:K14224]
TWT_RNA15  [KO:K14229]
TWT_RNA16  [KO:K14223]
TWT_RNA17  [KO:K14237]
TWT_RNA19  [KO:K14220]
TWT_RNA20  [KO:K14219]
TWT_RNA21  [KO:K14228]
TWT_RNA22  [KO:K14228]
TWT_RNA23  [KO:K14230]
TWT_RNA24  [KO:K14234]
TWT_RNA25  [KO:K14219]
TWT_RNA26  [KO:K14225]
TWT_RNA27  [KO:K14222]
TWT_RNA28  [KO:K14237]
TWT_RNA29  [KO:K14237]
TWT_RNA30  [KO:K14226]
TWT_RNA31  [KO:K14219]
TWT_RNA32  [KO:K14218]
TWT_RNA33  [KO:K14232]
TWT_RNA34  [KO:K14218]
TWT_RNA35  [KO:K14224]
TWT_RNA36  [KO:K14224]
TWT_RNA37  [KO:K14221]
TWT_RNA38  [KO:K14231]
TWT_RNA39  [KO:K14223]
TWT_RNA40  [KO:K14228]
TWT_RNA41  [KO:K14224]
TWT_RNA42  [KO:K14231]
TWT_RNA43  [KO:K14230]
TWT_RNA44  [KO:K14229]
TWT_RNA45  [KO:K14234]
TWT_RNA46  [KO:K14232]
TWT_RNA47  [KO:K14235]
TWT_RNA48  [KO:K14233]
TWT_RNA49  [KO:K14233]
TWT_RNA50  [KO:K14219]
TWT_RNA51  [KO:K14233]
TWT_RNA52  [KO:K14228]
TWT_RNA53  [KO:K14228]
TWT_RNA54  [KO:K14225]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
twh00250  Alanine, aspartate and glutamate metabolism
twh00260  Glycine, serine and threonine metabolism
twh00270  Cysteine and methionine metabolism
twh00290  Valine, leucine and isoleucine biosynthesis
twh00300  Lysine biosynthesis
twh00330  Arginine and proline metabolism
twh00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

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