KEGG   PATHWAY: vci00630
Entry
vci00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Vibrio cholerae O1 IEC224
Class
Metabolism; Carbohydrate metabolism
Pathway map
vci00630  Glyoxylate and dicarboxylate metabolism
vci00630

Module
vci_M00012  Glyoxylate cycle [PATH:vci00630]
vci_M00621  Glycine cleavage system [PATH:vci00630]
Other DBs
GO: 0046487 0043648
Organism
Vibrio cholerae O1 IEC224 [GN:vci]
Gene
O3Y_03425  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
O3Y_01385  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
O3Y_03420  malate synthase [KO:K01638] [EC:2.3.3.9]
O3Y_02000  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
O3Y_10105  gltA; type II citrate synthase [KO:K01647] [EC:2.3.3.1]
O3Y_02810  bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
O3Y_16768  putative acyltransferase [KO:K00626] [EC:2.3.1.9]
O3Y_16773  acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
O3Y_07690  catalase [KO:K03781] [EC:1.11.1.6]
O3Y_11990  glycerate dehydrogenase [KO:K00018] [EC:1.1.1.29]
O3Y_12565  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
O3Y_01805  alanine--glyoxylate transaminase / serine--pyruvate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
O3Y_13135  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
O3Y_04375  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
O3Y_14758  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
O3Y_14748  glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
O3Y_14768  glycine cleavage system T protein [KO:K00605] [EC:2.1.2.10]
O3Y_12635  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
O3Y_11550  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
O3Y_14753  glycine cleavage system protein H [KO:K02437]
O3Y_17733  glycerate kinase [KO:K00865] [EC:2.7.1.165]
O3Y_01330  keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
O3Y_07345  formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
O3Y_07340  formate dehydrogenase, iron-sulfur subunit [KO:K00124]
O3Y_07335  formate dehydrogenase, cytochrome B556 subunit [KO:K00127]
O3Y_09620  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
vci00010  Glycolysis / Gluconeogenesis
vci00020  Citrate cycle (TCA cycle)
vci00030  Pentose phosphate pathway
vci00053  Ascorbate and aldarate metabolism
vci00071  Fatty acid degradation
vci00230  Purine metabolism
vci00250  Alanine, aspartate and glutamate metabolism
vci00260  Glycine, serine and threonine metabolism
vci00620  Pyruvate metabolism
vci00710  Carbon fixation in photosynthetic organisms
vci00750  Vitamin B6 metabolism
vci00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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