KEGG   PATHWAY: vcp00010
Entry
vcp00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Vagococcus carniphilus
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
vcp00010  Glycolysis / Gluconeogenesis
vcp00010

Module
vcp_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:vcp00010]
vcp_M00002  Glycolysis, core module involving three-carbon compounds [PATH:vcp00010]
vcp_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:vcp00010]
vcp_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vcp00010]
Other DBs
GO: 0006096 0006094
Organism
Vagococcus carniphilus [GN:vcp]
Gene
H9L18_00225  [KO:K00016] [EC:1.1.1.27]
H9L18_01030  gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
H9L18_02390  adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
H9L18_03085  [KO:K04041] [EC:3.1.3.11]
H9L18_04175  [KO:K01223] [EC:3.2.1.86]
H9L18_04225  [KO:K01785] [EC:5.1.3.3]
H9L18_04385  ascB; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
H9L18_04705  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
H9L18_04720  [KO:K00627] [EC:2.3.1.12]
H9L18_04760  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
H9L18_04765  [KO:K00927] [EC:2.7.2.3]
H9L18_04770  [KO:K01803] [EC:5.3.1.1]
H9L18_04775  [KO:K15633] [EC:5.4.2.12]
H9L18_04780  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
H9L18_04940  nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
H9L18_04950  [KO:K00016] [EC:1.1.1.27]
H9L18_05675  [KO:K00128] [EC:1.2.1.3]
H9L18_05680  [KO:K01624] [EC:4.1.2.13]
H9L18_05775  ppdK; pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
H9L18_06100  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
H9L18_06680  [KO:K00128] [EC:1.2.1.3]
H9L18_06765  [KO:K25026]
H9L18_06885  [KO:K02777] [EC:2.7.1.-]
H9L18_07465  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
H9L18_07470  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
H9L18_08375  [KO:K01610] [EC:4.1.1.49]
H9L18_08820  [KO:K01810] [EC:5.3.1.9]
H9L18_09095  [KO:K01223] [EC:3.2.1.86]
H9L18_09230  [KO:K01835] [EC:5.4.2.2]
H9L18_09935  [KO:K01623] [EC:4.1.2.13]
H9L18_10275  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
H9L18_10280  [KO:K00627] [EC:2.3.1.12]
H9L18_10285  [KO:K00162] [EC:1.2.4.1]
H9L18_10290  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
H9L18_10395  nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
H9L18_10575  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
H9L18_12200  ascB; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
H9L18_12410  [KO:K01623] [EC:4.1.2.13]
H9L18_12435  [KO:K01803] [EC:5.3.1.1]
H9L18_12440  [KO:K01803] [EC:5.3.1.1]
H9L18_13395  [KO:K01223] [EC:3.2.1.86]
H9L18_14030  [KO:K01624] [EC:4.1.2.13]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
vcp00020  Citrate cycle (TCA cycle)
vcp00030  Pentose phosphate pathway
vcp00500  Starch and sucrose metabolism
vcp00620  Pyruvate metabolism
vcp00640  Propanoate metabolism
vcp00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

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