KEGG   PATHWAY: zof00909
Entry
zof00909                    Pathway                                
Name
Sesquiterpenoid and triterpenoid biosynthesis - Zingiber officinale (ginger)
Description
Sesquiterpenoids (C15 terpenoids) are a group of terpenoids consisting of three isoprene units. They are derive from farnesyl diphosphate (FPP) and can be cyclized to produce various skeletal structures. Sesquiterpenoid biosynthesis begins with the loss of diphosphate from FPP under the action of sesquiterpene synthesis enzymes, generating an allylic cation that is highly susceptible to intramolecular attacks. Cyclization of the farnesyl cation may take place onto either of the remaining double bonds with the result that 6-, 10-, or 11-membered rings may be formed. Many sesquiterpenoids have been isolated from plants, fungi, marine organisms, and Streptomyces species. This map shows a few examples of acyclic and cyclic sesquiterpenoids.
Class
Metabolism; Metabolism of terpenoids and polyketides
Pathway map
zof00909  Sesquiterpenoid and triterpenoid biosynthesis
zof00909

Other DBs
GO: 0016106 0016104
Organism
Zingiber officinale (ginger) [GN:zof]
Gene
122041920  squalene synthase 8-like isoform X1 [KO:K00801] [EC:2.5.1.21]
122046442  squalene synthase 8-like isoform X1 [KO:K00801] [EC:2.5.1.21]
121977218  squalene monooxygenase SE1-like isoform X1 [KO:K00511] [EC:1.14.14.17]
122051227  LOW QUALITY PROTEIN: squalene epoxidase 1-like [KO:K00511] [EC:1.14.14.17]
122051228  squalene monooxygenase SE1-like [KO:K00511] [EC:1.14.14.17]
121983819  squalene monooxygenase SE1-like [KO:K00511] [EC:1.14.14.17]
122036991  squalene monooxygenase SE1-like [KO:K00511] [EC:1.14.14.17]
122053576  squalene monooxygenase SE1-like [KO:K00511] [EC:1.14.14.17]
122055857  squalene monooxygenase SE1-like isoform X1 [KO:K00511] [EC:1.14.14.17]
121972198  squalene monooxygenase SE1-like isoform X1 [KO:K00511] [EC:1.14.14.17]
122008974  putative dihydroflavonol 4-reductase [KO:K15891] [EC:1.1.1.354]
122014952  putative dihydroflavonol 4-reductase [KO:K15891] [EC:1.1.1.354]
122026772  (3S,6E)-nerolidol synthase 1-like [KO:K14175] [EC:4.2.3.48]
122026775  (3S,6E)-nerolidol synthase 1-like [KO:K14175] [EC:4.2.3.48]
122026776  (3S,6E)-nerolidol synthase 1-like [KO:K14175] [EC:4.2.3.48]
122026778  (3S,6E)-nerolidol synthase 1-like [KO:K14175] [EC:4.2.3.48]
122027395  (3S,6E)-nerolidol synthase 1-like [KO:K14175] [EC:4.2.3.48]
122027544  (3S,6E)-nerolidol synthase 1-like [KO:K14175] [EC:4.2.3.48]
122027662  (3S,6E)-nerolidol synthase 1-like [KO:K14175] [EC:4.2.3.48]
122027819  (3S,6E)-nerolidol synthase 1-like [KO:K14175] [EC:4.2.3.48]
122027865  (3S,6E)-nerolidol synthase 2, chloroplastic/mitochondrial-like [KO:K14175] [EC:4.2.3.48]
122029243  (3S,6E)-nerolidol synthase 1-like [KO:K14175] [EC:4.2.3.48]
122029247  (3S,6E)-nerolidol synthase 1-like [KO:K14175] [EC:4.2.3.48]
122029248  (3S,6E)-nerolidol synthase 1-like [KO:K14175] [EC:4.2.3.48]
122029250  (3S,6E)-nerolidol synthase 1-like [KO:K14175] [EC:4.2.3.48]
122029976  (3S,6E)-nerolidol synthase 1-like [KO:K14175] [EC:4.2.3.48]
122030942  (3S,6E)-nerolidol synthase 1-like isoform X1 [KO:K14175] [EC:4.2.3.48]
122033495  (3S,6E)-nerolidol synthase 1-like isoform X1 [KO:K14175] [EC:4.2.3.48]
122018980  alpha-humulene synthase-like isoform X1 [KO:K15803] [EC:4.2.3.75]
121989430  alpha-humulene synthase-like isoform X1 [KO:K15803] [EC:4.2.3.75]
121989444  alpha-humulene synthase [KO:K15803] [EC:4.2.3.75]
121989994  alpha-humulene synthase-like [KO:K15803] [EC:4.2.3.75]
121990030  beta-eudesmol synthase-like [KO:K15803] [EC:4.2.3.75]
121990055  alpha-humulene synthase-like [KO:K15803] [EC:4.2.3.75]
121990068  alpha-humulene synthase-like [KO:K15803] [EC:4.2.3.75]
121990205  alpha-humulene synthase-like [KO:K15803] [EC:4.2.3.75]
121976856  beta-eudesmol synthase-like [KO:K15803] [EC:4.2.3.75]
121992250  beta-eudesmol synthase-like [KO:K15803] [EC:4.2.3.75]
121992308  beta-eudesmol synthase-like [KO:K15803] [EC:4.2.3.75]
121992309  beta-eudesmol synthase-like [KO:K15803] [EC:4.2.3.75]
121992471  alpha-humulene synthase-like [KO:K15803] [EC:4.2.3.75]
121992474  alpha-humulene synthase-like [KO:K15803] [EC:4.2.3.75]
121992478  alpha-humulene synthase-like [KO:K15803] [EC:4.2.3.75]
121992479  alpha-humulene synthase-like [KO:K15803] [EC:4.2.3.75]
121993824  alpha-humulene synthase-like [KO:K15803] [EC:4.2.3.75]
121993830  beta-eudesmol synthase-like [KO:K15803] [EC:4.2.3.75]
121993850  beta-eudesmol synthase-like [KO:K15803] [EC:4.2.3.75]
121993885  alpha-humulene synthase-like [KO:K15803] [EC:4.2.3.75]
121993999  alpha-humulene synthase-like [KO:K15803] [EC:4.2.3.75]
122033361  alpha-humulene synthase-like isoform X1 [KO:K15803] [EC:4.2.3.75]
121996195  beta-eudesmol synthase-like [KO:K15803] [EC:4.2.3.75]
122013680  alpha-humulene synthase-like [KO:K15803] [EC:4.2.3.75]
122013691  alpha-humulene synthase-like [KO:K15803] [EC:4.2.3.75]
122013701  alpha-humulene synthase-like [KO:K15803] [EC:4.2.3.75]
122036371  alpha-humulene synthase-like [KO:K15803] [EC:4.2.3.75]
122036690  alpha-humulene synthase-like [KO:K15803] [EC:4.2.3.75]
122000228  beta-eudesmol synthase-like [KO:K15803] [EC:4.2.3.75]
122015451  alpha-humulene synthase-like isoform X1 [KO:K15803] [EC:4.2.3.75]
122001961  (+)-germacrene D synthase [KO:K15803] [EC:4.2.3.75]
122038822  alpha-humulene synthase-like [KO:K15803] [EC:4.2.3.75]
122019938  premnaspirodiene oxygenase-like [KO:K15472] [EC:1.14.14.151]
121979433  premnaspirodiene oxygenase-like [KO:K15472] [EC:1.14.14.151]
121980228  premnaspirodiene oxygenase-like [KO:K15472] [EC:1.14.14.151]
121984137  premnaspirodiene oxygenase-like [KO:K15472] [EC:1.14.14.151]
121984139  premnaspirodiene oxygenase-like [KO:K15472] [EC:1.14.14.151]
122021800  premnaspirodiene oxygenase-like [KO:K15472] [EC:1.14.14.151]
122023670  premnaspirodiene oxygenase-like [KO:K15472] [EC:1.14.14.151]
121990212  alpha-humulene synthase-like [KO:K14183] [EC:4.2.3.13]
121992481  alpha-humulene synthase-like [KO:K14183] [EC:4.2.3.13]
121994006  alpha-humulene synthase-like [KO:K14183] [EC:4.2.3.13]
121994844  alpha-humulene synthase-like [KO:K14183] [EC:4.2.3.13]
121996433  alpha-humulene synthase-like [KO:K14183] [EC:4.2.3.13]
122036366  alpha-humulene synthase-like [KO:K14183] [EC:4.2.3.13]
Compound
C00448  trans,trans-Farnesyl diphosphate
C00751  Squalene
C01054  (S)-2,3-Epoxysqualene
C01126  (2E,6E)-Farnesol
C01841  Pentalenene
C01860  Trichodiene
C02004  Aristolochene
C03220  (2Z,6E)-Farnesol
C03428  Presqualene diphosphate
C03461  2-trans,6-trans-Farnesal
C06079  PR-toxin
C06080  Nivalenol
C06083  Tetrahymanol
C06309  Diplopterol
C06310  Diploptene
C06394  delta-Cadinene
C07667  Gossypol
C08615  alpha-Amyrin
C08616  beta-Amyrin
C08628  Lupeol
C08637  Taraxerol
C09382  Costunolide
C09627  Capsidiol
C09629  beta-Caryophyllene
C09665  alpha-Farnesene
C09666  beta-Farnesene
C09672  Germacrene B
C09684  Humulene
C09699  Longifolene
C09704  Nerolidol
C09723  beta-Selinene
C09737  Solavetivone
C12142  Vetispiradiene
C16028  Amorpha-4,11-diene
C16141  (+)-Germacrene A
C16142  (-)-Germacrene D
C16143  (1E,4S,5E,7R)-Germacra-1(10),5-dien-11-ol
C16269  (+)-epi-Isozizaene
C16286  Geosmin
C16775  (S)-beta-Bisabolene
C16814  gamma-Bisabolene
C16829  gamma-Humulene
C17277  (+)-Valencene
C17953  (5S)-Albaflavenol
C17954  Albaflavenone
C17955  (5R)-Albaflavenol
C18245  8-epi-Cedrol
C19676  Germacra-1(10),4,11(13)-trien-12-ol
C19678  Germacrene A acid
C19708  5-Epiaristolochene
C19711  Solavetivol
C19732  24-Hydroxy-beta-amyrin
C19736  (+)-alpha-Santalene
C19740  (+)-alpha-Barbatene
C19742  (+)-delta-Selinene
C19746  (3R,6E)-Nerolidol
C19747  Germacrene C
C19748  (E)-gamma-Bisabolene
C19749  (E)-alpha-Bisabolene
C19752  (S)-beta-Macrocarpene
C19753  cis-Muurola-3,5-diene
C19755  Patchoulol
C19801  Isomultiflorenol
C19819  Cucurbitadienol
C19820  Protostadienol
C19828  Arabidiol
C19829  Dammarenediol-II
C19832  Thalianol
C19833  Germanicol
C19834  Dammara-20,24-diene
C19835  Camelliol C
C19863  Lupan-3beta,20-diol
C19908  (+)-beta-Chamigrene
C19918  Parkeol
C19939  Pentalen-13-al
C19973  (+)-beta-Caryophyllene
C19974  (+)-Caryolan-1-ol
C20159  7-epi-alpha-Selinene
C20163  5-epi-alpha-Selinene
C20181  Avermitilol
C20187  Achilleol B
C20191  alpha-seco-Amyrin
C20192  Marneral
C20193  beta-seco-Amyrin
C20195  Tirucalla-7,24-dien-3beta-ol
C20200  Baruol
C20478  (E)-2-epi-beta-Caryophyllene
C20479  (+)-epi-alpha-Bisabolol
C20724  (+)-Thujopsene
Reference
PMID:9371761
  Authors
Crock J, Wildung M, Croteau R
  Title
Isolation and bacterial expression of a sesquiterpene synthase cDNA clone from peppermint (Mentha x piperita, L.) that produces the aphid alarm pheromone (E)-beta-farnesene.
  Journal
Proc Natl Acad Sci U S A 94:12833-8 (1997)
DOI:10.1073/pnas.94.24.12833
Reference
  Authors
Nagegowda DA, Gutensohn M, Wilkerson CG, Dudareva N
  Title
Two nearly identical terpene synthases catalyze the formation of nerolidol and linalool in snapdragon flowers.
  Journal
Plant J 55:224-39 (2008)
DOI:10.1111/j.1365-313X.2008.03496.x
Reference
  Authors
Bertea CM, Voster A, Verstappen FW, Maffei M, Beekwilder J, Bouwmeester HJ
  Title
Isoprenoid biosynthesis in Artemisia annua: cloning and heterologous expression of a germacrene A synthase from a glandular trichome cDNA library.
  Journal
Arch Biochem Biophys 448:3-12 (2006)
DOI:10.1016/j.abb.2006.02.026
Reference
  Authors
de Kraker JW, Franssen MC, Joerink M, de Groot A, Bouwmeester HJ
  Title
Biosynthesis of costunolide, dihydrocostunolide, and leucodin. Demonstration of cytochrome p450-catalyzed formation of the lactone ring present in sesquiterpene lactones of chicory.
  Journal
Plant Physiol 129:257-68 (2002)
DOI:10.1104/pp.010957
Reference
  Authors
Jaroszewski JW, Strom-Hansen T, Hansen SH, Thastrup O, Kofod H
  Title
On the botanical distribution of chiral forms of gossypol.
  Journal
Planta Med 58:454-8 (1992)
DOI:10.1055/s-2006-961512
Reference
PMID:9442047
  Authors
Steele CL, Crock J, Bohlmann J, Croteau R
  Title
Sesquiterpene synthases from grand fir (Abies grandis). Comparison of constitutive and wound-induced activities, and cDNA isolation, characterization, and bacterial expression of delta-selinene synthase and gamma-humulene synthase.
  Journal
J Biol Chem 273:2078-89 (1998)
DOI:10.1074/jbc.273.4.2078
Reference
  Authors
Fraga BM
  Title
Natural sesquiterpenoids.
  Journal
Nat Prod Rep 25:1180-209 (2008)
DOI:10.1039/b806216c
Reference
  Authors
Field B, Fiston-Lavier AS, Kemen A, Geisler K, Quesneville H, Osbourn AE
  Title
Formation of plant metabolic gene clusters within dynamic chromosomal regions.
  Journal
Proc Natl Acad Sci U S A 108:16116-21 (2011)
DOI:10.1073/pnas.1109273108
Reference
  Authors
Field B, Osbourn AE
  Title
Metabolic diversification--independent assembly of operon-like gene clusters in different plants.
  Journal
Science 320:543-7 (2008)
DOI:10.1126/science.1154990
Reference
  Authors
Qi X, Bakht S, Leggett M, Maxwell C, Melton R, Osbourn A
  Title
A gene cluster for secondary metabolism in oat: implications for the evolution of metabolic diversity in plants.
  Journal
Proc Natl Acad Sci U S A 101:8233-8 (2004)
DOI:10.1073/pnas.0401301101
Related
pathway
zof00100  Steroid biosynthesis
zof00900  Terpenoid backbone biosynthesis
KO pathway
ko00909   
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