Messenger RNA Biogenesis - Chrysemys picta (western painted turtle)

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     KO
 Eukaryotic type
   mRNA processing factors
   mRNA surveillance and transport factors
     Transport factors
     Surveillance factors
     Factors involved in mRNA localization
     mRNA cycle factors
       Common to processing body (P body) and stress granule
       P-body specific factors
       Stress granule specific factors
         101932475 TIAL1; nucleolysin TIAR isoform X1
         101940417 TIA1; nucleolysin TIA-1 isoform X1
         101948320 PABPC4; polyadenylate-binding protein 4 isoform X1
         101951430 PABPC1L; polyadenylate-binding protein 1-like isoform X1
         101935964 PABPC1; polyadenylate-binding protein 1 isoform X1
         101950430 STAU1; double-stranded RNA-binding protein Staufen homolog 1 isoform X4
         101951377 STAU2; double-stranded RNA-binding protein Staufen homolog 2 isoform X2
         101937821 FXR2; LOW QUALITY PROTEIN: fragile X mental retardation syndrome-related protein 2
         101940156 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X1
         101935280 FMR1; synaptic functional regulator FMR1 isoform X1
         101948717 ZBP1; Z-DNA-binding protein 1
         101931617 ELAVL1; ELAV-like protein 1
         101936095 G3BP1; ras GTPase-activating protein-binding protein 1
         101932380 G3BP2; ras GTPase-activating protein-binding protein 2 isoform X1
         101949175 EIF2A; eukaryotic translation initiation factor 2A isoform X1
         101953590 EIF3B; eukaryotic translation initiation factor 3 subunit B
         101938630 EIF4A1; eukaryotic initiation factor 4A-I
         101946076 EIF4A2; eukaryotic initiation factor 4A-II isoform X1
         101949216 EIF4A3; eukaryotic initiation factor 4A-III
         101944726 EIF4B; eukaryotic translation initiation factor 4B isoform X1
         101948994 EIF4G2; eukaryotic translation initiation factor 4 gamma 2
         101935023 EIF4G3; eukaryotic translation initiation factor 4 gamma 3
         101939047 EIF4G1; eukaryotic translation initiation factor 4 gamma 1 isoform X5
         101949953 RPS6KA3; ribosomal protein S6 kinase alpha-3 isoform X1
         101948507 RPS6KA1; ribosomal protein S6 kinase alpha-1 isoform X1
         101935500 RPS6KA6; ribosomal protein S6 kinase alpha-6
         101935845 ribosomal protein S6 kinase alpha-2
         101936055 RACK1; receptor of activated protein C kinase 1
         101946577 TNF receptor-associated factor 1-like isoform X2
         101933518 TRAF2; TNF receptor-associated factor 2 isoform X1
         101933834 NXF1; nuclear RNA export factor 1
         101932281 HDAC6; histone deacetylase 6
         101942475 TDRD3; tudor domain-containing protein 3 isoform X1
         101937127 LARP4B; la-related protein 4B isoform X2
         101941248 LARP4; la-related protein 4 isoform X1
K13201 TIA1; nucleolysin TIA-1/TIAR 
K13201 TIA1; nucleolysin TIA-1/TIAR 
K13126 PABPC; polyadenylate-binding protein 
K13126 PABPC; polyadenylate-binding protein 
K13126 PABPC; polyadenylate-binding protein 
K17597 STAU; double-stranded RNA-binding protein Staufen 
K17597 STAU; double-stranded RNA-binding protein Staufen 
K15516 FMR; fragile X mental retardation protein 
K15516 FMR; fragile X mental retardation protein 
K15516 FMR; fragile X mental retardation protein 
K12965 ZBP1; Z-DNA binding protein 1 
K13088 ELAVL1; ELAV-like protein 1 
K17265 G3BP1; Ras GTPase-activating protein-binding protein 1 [EC:5.6.2.5 5.6.2.3] 
K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
K15026 EIF2A; translation initiation factor 2A 
K03253 EIF3B; translation initiation factor 3 subunit B 
K03257 EIF4A; translation initiation factor 4A 
K03257 EIF4A; translation initiation factor 4A 
K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
K03258 EIF4B; translation initiation factor 4B 
K03260 EIF4G; translation initiation factor 4G 
K03260 EIF4G; translation initiation factor 4G 
K03260 EIF4G; translation initiation factor 4G 
K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein 
K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27] 
K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27] 
K14284 NXF; nuclear RNA export factor 
K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98] 
K18404 TDRD3; tudor domain-containing protein 3 
K18763 LARP4; la-related protein 4 
K18763 LARP4; la-related protein 4 
   mRNA degradation factors
 
 Prokaryotic type

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Last updated: April 25, 2024