KEGG Orthology (KO) - Pseudomonas putida W619

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     KO
 09100 Metabolism
 
   09101 Carbohydrate metabolism
 
   09102 Energy metabolism
 
   09103 Lipid metabolism
 
   09104 Nucleotide metabolism
 
   09105 Amino acid metabolism
 
   09106 Metabolism of other amino acids
     00410 beta-Alanine metabolism [PATH:ppw00410]
     00430 Taurine and hypotaurine metabolism [PATH:ppw00430]
     00440 Phosphonate and phosphinate metabolism [PATH:ppw00440]
     00450 Selenocompound metabolism [PATH:ppw00450]
     00460 Cyanoamino acid metabolism [PATH:ppw00460]
     00470 D-Amino acid metabolism [PATH:ppw00470]
       PputW619_0201 alanine racemase
       PputW619_0946 D-alanine--D-alanine ligase
       PputW619_3672 D-alanine--D-alanine ligase
       PputW619_3677 D-alanine--D-alanine ligase
       PputW619_1955 L-asparaginase, type II
       PputW619_4453 glutamate racemase
       PputW619_0942 UDP-N-acetylmuramoylalanine--D-glutamate ligase
       PputW619_0244 Diaminopimelate epimerase
       PputW619_0245 diaminopimelate decarboxylase
       PputW619_2817 Aldehyde Dehydrogenase
       PputW619_1998 Aldehyde Dehydrogenase
       PputW619_3112 Aldehyde Dehydrogenase
       PputW619_0200 D-amino-acid dehydrogenase
       PputW619_3638 D-amino-acid dehydrogenase
K01775 alr; alanine racemase [EC:5.1.1.1]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
K01776 murI; glutamate racemase [EC:5.1.1.3]
K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
     00480 Glutathione metabolism [PATH:ppw00480]
 
   09107 Glycan biosynthesis and metabolism
     00510 N-Glycan biosynthesis
     00513 Various types of N-glycan biosynthesis
     00512 Mucin type O-glycan biosynthesis
     00515 Mannose type O-glycan biosynthesis
     00514 Other types of O-glycan biosynthesis
     00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
     00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
     00533 Glycosaminoglycan biosynthesis - keratan sulfate
     00531 Glycosaminoglycan degradation
     00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
     00601 Glycosphingolipid biosynthesis - lacto and neolacto series
     00603 Glycosphingolipid biosynthesis - globo and isoglobo series
     00604 Glycosphingolipid biosynthesis - ganglio series
     00511 Other glycan degradation
     00540 Lipopolysaccharide biosynthesis [PATH:ppw00540]
     00542 O-Antigen repeat unit biosynthesis
     00541 O-Antigen nucleotide sugar biosynthesis [PATH:ppw00541]
     00550 Peptidoglycan biosynthesis [PATH:ppw00550]
       PputW619_4251 UDP-N-acetylglucosamine 1-carboxyvinyltransferase
       PputW619_1515 UDP-N-acetylenolpyruvoylglucosamine reductase
       PputW619_0945 UDP-N-acetylmuramate--alanine ligase
       PputW619_0942 UDP-N-acetylmuramoylalanine--D-glutamate ligase
       PputW619_0939 UDP-N-acetylmuramyl-tripeptide synthetase
       PputW619_0946 D-alanine--D-alanine ligase
       PputW619_3672 D-alanine--D-alanine ligase
       PputW619_3677 D-alanine--D-alanine ligase
       PputW619_0940 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
       PputW619_4078 undecaprenyl diphosphate synthase
       PputW619_2756 undecaprenol kinase
       PputW619_0941 phospho-N-acetylmuramoyl-pentapeptide-transferase
       PputW619_0944 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
       PputW619_0358 monofunctional biosynthetic peptidoglycan transglycosylase
       PputW619_0381 penicillin-binding protein, 1A family
       PputW619_0751 penicillin-binding protein 1B
       PputW619_4592 penicillin-binding protein 1C
       PputW619_3060 penicillin-binding protein 2
       PputW619_0614 penicillin-binding protein 2
       PputW619_0938 Peptidoglycan glycosyltransferase
       PputW619_0618 Serine-type D-Ala-D-Ala carboxypeptidase
       PputW619_1617 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
     00552 Teichoic acid biosynthesis [PATH:ppw00552]
     00571 Lipoarabinomannan (LAM) biosynthesis
     00572 Arabinogalactan biosynthesis - Mycobacterium
     00543 Exopolysaccharide biosynthesis [PATH:ppw00543]
 
   09108 Metabolism of cofactors and vitamins
 
   09109 Metabolism of terpenoids and polyketides
 
   09110 Biosynthesis of other secondary metabolites
 
   09111 Xenobiotics biodegradation and metabolism
 
   09112 Not included in regular maps
 
 09120 Genetic Information Processing
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
   09161 Cancer: overview
 
   09162 Cancer: specific types
 
   09172 Infectious disease: viral
 
   09171 Infectious disease: bacterial
 
   09174 Infectious disease: parasitic
 
   09163 Immune disease
 
   09164 Neurodegenerative disease
 
   09165 Substance dependence
 
   09166 Cardiovascular disease
 
   09167 Endocrine and metabolic disease
 
   09175 Drug resistance: antimicrobial
     01501 beta-Lactam resistance [PATH:ppw01501]
     01502 Vancomycin resistance [PATH:ppw01502]
       PputW619_0946 D-alanine--D-alanine ligase
       PputW619_3672 D-alanine--D-alanine ligase
       PputW619_3677 D-alanine--D-alanine ligase
       PputW619_0201 alanine racemase
       PputW619_0940 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
       PputW619_0941 phospho-N-acetylmuramoyl-pentapeptide-transferase
       PputW619_0944 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01775 alr; alanine racemase [EC:5.1.1.1]
K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
     01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ppw01503]
 
   09176 Drug resistance: antineoplastic
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
     01000 Enzymes [BR:ppw01000]
     01001 Protein kinases [BR:ppw01001]
     01009 Protein phosphatases and associated proteins [BR:ppw01009]
     01002 Peptidases and inhibitors [BR:ppw01002]
     01003 Glycosyltransferases [BR:ppw01003]
     01005 Lipopolysaccharide biosynthesis proteins [BR:ppw01005]
     01011 Peptidoglycan biosynthesis and degradation proteins [BR:ppw01011]
       PputW619_4251 UDP-N-acetylglucosamine 1-carboxyvinyltransferase
       PputW619_1515 UDP-N-acetylenolpyruvoylglucosamine reductase
       PputW619_0945 UDP-N-acetylmuramate--alanine ligase
       PputW619_0942 UDP-N-acetylmuramoylalanine--D-glutamate ligase
       PputW619_0939 UDP-N-acetylmuramyl-tripeptide synthetase
       PputW619_0946 D-alanine--D-alanine ligase
       PputW619_3672 D-alanine--D-alanine ligase
       PputW619_3677 D-alanine--D-alanine ligase
       PputW619_0201 alanine racemase
       PputW619_4453 glutamate racemase
       PputW619_0622 peptidase U61 LD-carboxypeptidase A
       PputW619_0941 phospho-N-acetylmuramoyl-pentapeptide-transferase
       PputW619_0944 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
       PputW619_2756 undecaprenol kinase
       PputW619_4561 integral membrane protein MviN
       PputW619_0381 penicillin-binding protein, 1A family
       PputW619_0751 penicillin-binding protein 1B
       PputW619_4592 penicillin-binding protein 1C
       PputW619_3060 penicillin-binding protein 2
       PputW619_0614 penicillin-binding protein 2
       PputW619_0938 Peptidoglycan glycosyltransferase
       PputW619_0618 Serine-type D-Ala-D-Ala carboxypeptidase
       PputW619_1617 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
       PputW619_2097 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
       PputW619_0358 monofunctional biosynthetic peptidoglycan transglycosylase
       PputW619_1762 ErfK/YbiS/YcfS/YnhG family protein
       PputW619_1648 Lytic transglycosylase catalytic
       PputW619_0494 MltA domain protein
       PputW619_0623 lytic murein transglycosylase
       PputW619_0616 lytic murein transglycosylase B
       PputW619_3470 MLTD_N domain protein
       PputW619_4190 Lytic transglycosylase catalytic
       PputW619_1529 aminodeoxychorismate lyase
       PputW619_0617 rare lipoprotein A
       PputW619_4286 rare lipoprotein A
       PputW619_4688 N-acetylmuramoyl-L-alanine amidase
       PputW619_5098 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
       PputW619_4405 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01775 alr; alanine racemase [EC:5.1.1.1]
K01776 murI; glutamate racemase [EC:5.1.1.3]
K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
K03980 murJ; putative peptidoglycan lipid II flippase
K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
K16291 erfK; L,D-transpeptidase ErfK/SrfK
K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
     01004 Lipid biosynthesis proteins [BR:ppw01004]
     01008 Polyketide biosynthesis proteins [BR:ppw01008]
     01006 Prenyltransferases [BR:ppw01006]
     01007 Amino acid related enzymes [BR:ppw01007]
     00199 Cytochrome P450
     00194 Photosynthesis proteins [BR:ppw00194]
 
   09182 Protein families: genetic information processing
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: May 9, 2024