KEGG Orthology (KO) - Rickettsia typhi B9991CWPP

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:rtb03030]
     03410 Base excision repair [PATH:rtb03410]
       RTB9991CWPP_03515 endonuclease III
       RTB9991CWPP_04000 DNA polymerase
       RTB9991CWPP_01675 3-methyladenine DNA glycosylase
       RTB9991CWPP_03225 exodeoxyribonuclease III
       RTB9991CWPP_01225 exodeoxyribonuclease III
       RTB9991CWPP_03670 DNA polymerase I
       RTB9991CWPP_02495 single-stranded-DNA-specific exonuclease RecJ
       RTB9991CWPP_03395 ligA; NAD-dependent DNA ligase LigA
K10773 NTH; endonuclease III [EC:4.2.99.18]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
     03420 Nucleotide excision repair [PATH:rtb03420]
     03430 Mismatch repair [PATH:rtb03430]
     03440 Homologous recombination [PATH:rtb03440]
     03450 Non-homologous end-joining
     03460 Fanconi anemia pathway
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:rtb03000]
     03021 Transcription machinery [BR:rtb03021]
     03019 Messenger RNA biogenesis [BR:rtb03019]
     03041 Spliceosome
     03011 Ribosome [BR:rtb03011]
     03009 Ribosome biogenesis [BR:rtb03009]
     03016 Transfer RNA biogenesis [BR:rtb03016]
     03012 Translation factors [BR:rtb03012]
     03110 Chaperones and folding catalysts [BR:rtb03110]
     04131 Membrane trafficking [BR:rtb04131]
     04121 Ubiquitin system
     03051 Proteasome [BR:rtb03051]
     03032 DNA replication proteins [BR:rtb03032]
     03036 Chromosome and associated proteins [BR:rtb03036]
     03400 DNA repair and recombination proteins [BR:rtb03400]
       RTB9991CWPP_01675 3-methyladenine DNA glycosylase
       RTB9991CWPP_03515 endonuclease III
       RTB9991CWPP_01900 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
       RTB9991CWPP_04000 DNA polymerase
       RTB9991CWPP_03225 exodeoxyribonuclease III
       RTB9991CWPP_01225 exodeoxyribonuclease III
       RTB9991CWPP_02495 single-stranded-DNA-specific exonuclease RecJ
       RTB9991CWPP_03395 ligA; NAD-dependent DNA ligase LigA
       RTB9991CWPP_03670 DNA polymerase I
       RTB9991CWPP_03955 uvrA; excinuclease ABC subunit A
       RTB9991CWPP_00955 excinuclease ABC subunit B
       RTB9991CWPP_02705 uvrC; excinuclease ABC subunit C
       RTB9991CWPP_02145 DNA helicase II
       RTB9991CWPP_00635 rpoB; DNA-directed RNA polymerase subunit beta
       RTB9991CWPP_00640 DNA-directed RNA polymerase subunit beta'
       RTB9991CWPP_03025 DNA-directed RNA polymerase subunit alpha
       RTB9991CWPP_02735 rpoZ; DNA-directed RNA polymerase subunit omega
       RTB9991CWPP_02825 transcription-repair coupling factor
       RTB9991CWPP_01410 DNA mismatch repair protein MutS
       RTB9991CWPP_04175 mutL; DNA mismatch repair protein
       RTB9991CWPP_03220 xseA; exodeoxyribonuclease VII large subunit
       RTB9991CWPP_01670 exodeoxyribonuclease VII small subunit
       RTB9991CWPP_03680 dnaE; DNA polymerase III subunit alpha
       RTB9991CWPP_02005 DNA polymerase III subunit beta
       RTB9991CWPP_04145 DNA polymerase III subunit chi
       RTB9991CWPP_00875 holA; DNA polymerase III subunit delta
       RTB9991CWPP_00795 DNA polymerase III subunit delta'
       RTB9991CWPP_03445 DNA polymerase III subunit epsilon
       RTB9991CWPP_04105 DNA polymerase III subunits gamma and tau
       RTB9991CWPP_03960 single-stranded DNA-binding protein
       RTB9991CWPP_03595 recA; recombinase A
       RTB9991CWPP_01835 ruvA; Holliday junction DNA helicase RuvA
       RTB9991CWPP_01840 ruvB; Holliday junction DNA helicase RuvB
       RTB9991CWPP_00075 ruvC; Holliday junction resolvase
       RTB9991CWPP_02560 primosome assembly protein PriA
       RTB9991CWPP_02585 DNA repair protein RadA
       RTB9991CWPP_00495 recF; recombination protein F
       RTB9991CWPP_02805 ATP-dependent DNA helicase RecG
       RTB9991CWPP_02595 recO; DNA repair protein RecO
       RTB9991CWPP_02100 recR; recombination protein RecR
       RTB9991CWPP_00845 DNA repair protein RecN
       RTB9991CWPP_03460 ATP-dependent helicase/nuclease
       RTB9991CWPP_01920 hypothetical protein
       RTB9991CWPP_00970 DNA gyrase subunit A
       RTB9991CWPP_02745 gyrB; DNA gyrase subunit B
       RTB9991CWPP_01555 DNA topoisomerase I
       RTB9991CWPP_00790 DNA-binding protein HU
       RTB9991CWPP_03375 integration host factor alpha subunit
       RTB9991CWPP_02475 integration host factor beta subunit
       RTB9991CWPP_02435 ribonucleotide-diphosphate reductase subunit alpha
       RTB9991CWPP_02430 nrdF; ribonucleotide-diphosphate reductase subunit beta
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K10773 NTH; endonuclease III [EC:4.2.99.18]
K01520 dut; dUTP pyrophosphatase [EC:3.6.1.23]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA [EC:3.6.4.12]
K03551 ruvB; holliday junction DNA helicase RuvB [EC:3.6.4.12]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:3.6.4.12]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:3.1.-.- 3.6.4.12]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:3.1.-.- 3.6.4.12]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
     03029 Mitochondrial biogenesis [BR:rtb03029]
 
   09183 Protein families: signaling and cellular processes
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: January 17, 2020