KEGG Plant Resource
KEGG Plant is an interface to plant related datasets that are dispersed in PATHWAY, BRITE, GENOME, GENES, COMPOUND, DISEASE and DRUG databases. The following list shows plant-specific datasets, excluding those that are relevant to both plants and other organism groups, such as conserved pathways for metabolism, transport and genetic information processing.
Plant pathways
- Global map
- Biosynthesis of secondary metabolites
- Regular pathway maps
- Many maps in Metabolism of terpenoids and polyketides
Many maps in Biosynthesis of other secondary metabolites
Plant hormone signal transduction
Circadian rhythm - plant
Plant-pathogen interaction
- Chemical structure
transformation maps - Biosynthesis of plant secondary metabolites
- Biosynthesis of phenylpropanoids
Biosynthesis of terpenoids and steroids
Biosynthesis of alkaloids derived from shikimate pathway
Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid
Biosynthesis of alkaloids derived from histidine and purine
Biosynthesis of alkaloids derived from terpenoid and polyketide
Biosynthesis of plant hormones - Biosynthesis of phenylpropanoids
Reference
- Kanehisa, M.; KEGG bioinformatics resource for plant genomics and metabolomics. In "Plant Bioinformatics: Methods and Protocols" (Edwards, D., ed.), Humana Press, Methods Mol. Biol. 1374, 55-70 (2016). [pubmed]
Last updated: December 15, 2017