KEGG Plant Resource
KEGG Plant is an interface to plant related datasets that are dispersed in PATHWAY, BRITE, GENOME, GENES, COMPOUND, DISEASE and DRUG databases. The datasets are summarized below.
| Category | Brite file |
| Plant genome | 08613 KEGG organisms: plants |
| Plant KO | 00194 Photosynthesis proteins |
| Plant metabolite | 08003 Phytochemical compounds |
| Herbal medicine | 08305 Crude drugs |
| 08304 Traditional Chinese Medicine in Japan | |
| Plant pathogen | 08605 Plant pathogens |
| Category | Pathway map or category |
| Metabolic pathway | 01110 Biosynthesis of secondary metabolites |
| Many maps in Metabolism of terpenoids and polyketides |
|
| Many maps in Biosynthesis of other secondary metabolites |
|
| Many modules in Biosynthesis of terpenoids and polyketides | |
| Many modules in Biosynthesis of secondary metabolites | |
| Metabolic pathway (chemical structure transformation) |
01060 Biosynthesis of plant secondary metabolites |
| 01061 Biosynthesis of phenylpropanoids | |
| 01062 Biosynthesis of terpenoids and steroids | |
| 01063 Biosynthesis of alkaloids derived from shikimate pathway | |
| 01064 Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid | |
| 01065 Biosynthesis of alkaloids derived from histidine and purine | |
| 01066 Biosynthesis of alkaloids derived from terpenoid and polyketide | |
| 01070 Biosynthesis of plant hormones | |
| Other pathway | 04075 Plant hormone signal transduction |
| 04721 Circadian rhythm - plant |
|
| 04642 Plant-pathogen interaction |
| Category | Brite file |
| Pesticide and herbicide | 08007 Pesticides |
| 08006 Endocrine disrupting compounds |
Reference
- Kanehisa, M.; KEGG bioinformatics resource for plant genomics and metabolomics. Methods Mol. Biol. 1374, 55-70 (2016). [pubmed]
Last updated: May 1, 2021