SSDB Best Search Result

Entry:raq:Rahaq2_4057 (779 a.a.)
Name:PAS domain S-box
KO:K07648 two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB
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Search Result : 202 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
smar:SM39_3796 hybrid sensory histidine kinase in two-c K07648     779     4363     0.856      779     
yen:YE3733 aerobic respiration control sensor/response  K07648     778     4310     0.837      779     
yps:YPTB3500 aerobic respiration control sensor/respons K07648     778     4295     0.837      779     
ypk:y0126 aerobic respiration sensor-response protein;  K07648     778     4295     0.837      779     
ype:YPO3555 aerobic respiration control sensor/response K07648     778     4295     0.837      779     
eca:ECA0314 aerobic respiration control sensor protein  K07648     789     4117     0.802      788     
eam:EAMY_0309 aerobic respiration sensor-response prote K07648     779     4037     0.784      779     
seo:STM14_4016 aerobic respiration control sensor prote K07648     778     3979     0.776      781     
stm:STM3328 sensory histidine kinase in two-component r K07648     778     3977     0.776      781     
sty:STY3507 aerobic respiration control sensor protein  K07648     778     3960     0.775      781     
enc:ECL_04591 aerobic respiration control sensor protei K07648     777     3957     0.776      780     
cro:ROD_46101 aerobic respiration control protein (bifu K07648     778     3939     0.770      781     
kpn:KPN_03619 aerobic respiration sensor-response prote K07648     779     3913     0.764      780     
sfl:SF3250 aerobic respiration control sensor protein A K07648     778     3899     0.767      781     
eco:b3210 sensor histidine kinase ArcB                  K07648     778     3899     0.767      781     
ecj:JW5536 hybrid sensory histidine kinase in two-compo K07648     778     3899     0.767      781     
ecs:ECs_4089 aerobic respiration control sensor histidi K07648     778     3897     0.767      781     
ece:Z4574 aerobic respiration sensor-response protein;  K07648     778     3897     0.767      781     
vfi:VF_2122 hybrid sensory histidine kinase in two-comp K07648     788     3083     0.588      794     
vpa:VP0487 sensor histidine kinase FexB                 K07648     783     3028     0.591      785     
vvu:VV1_0550 Aerobic respiration control sensor protein K07648     780     3026     0.586      782     
vch:VC_2369 sensor histidine kinase FexB                K07648     785     3012     0.582      790     
pmu:PM0313 ArcB                                         K07648     618     1511     0.458      535     
apl:APL_0935 aerobic respiration control sensor protein K07648     616     1457     0.459      521     
gsu:GSU2314 sensor histidine kinase response regulator,           1025      956     0.297      779     
ccr:CC_0026 sensory box histidine kinase/response regul            900      867     0.331      531     
rpa:TX73_022895 ATP-binding protein                                873      863     0.304      625     
bja:bll4760 two-component hybrid sensor and regulator              775      851     0.335      550     
syn:slr2104 hybrid sensory kinase                       K11527     950      839     0.337      487     
gvi:glr0718 ORF_ID:glr0718                                         856      826     0.397      385     
bpe:BP1877 virulence sensor protein                     K07679    1238      825     0.315      534     
rru:Rru_A3492 Cache sensor hybrid histidine kinase                1041      823     0.339      563     
rsp:RSP_3044 DMSO/TMAO-sensor hybrid histidine kinase              813      823     0.337      493     
cau:Caur_3108 PAS sensor protein                                   915      805     0.306      519     
psb:Psyr_1292 multi-sensor hybrid histidine kinase      K07679    1209      805     0.282      617     
reh:H16_B1085 signal transduction histidine kinase cont K07679     608      803     0.337      534     
lil:LA_3996 histidine kinase response regulator hybrid             804      802     0.343      394     
dvu:DVU_2616 sensory box histidine kinase/response regu           1000      801     0.312      528     
lpn:lpg2180 sensory box histidine kinase/response regul            828      798     0.286      636     
pae:PA3946 two-component sensor                         K07679    1212      791     0.290      652     
npu:Npun_R1798 multi-sensor hybrid histidine kinase               1098      788     0.308      607     
xcc:XCC2360 two-component system sensor protein                   1364      788     0.300      606     
pfl:PFL_2985 sensory box sensor histidine kinase/respon K19616    1059      785     0.296      655     
ppu:PP_2100 two-component sensor protein                K07679    1211      784     0.273      637     
pst:PSPTO_1482 sensory box histidine kinase/response re K07679    1213      782     0.282      646     
xac:XAC2492 two-component system sensor protein                   1364      782     0.311      572     
avn:Avin_25170 hybrid histidine kinase                             642      780     0.316      516     
xom:XOO2639 two-component system sensor protein                   1364      778     0.305      567     
son:SO_1230 TMAO-responsive two component signal transd K07647    1025      751     0.313      536     
afm:AFUA_6G10240 sensor histidine kinase/response regul K19692     708      734     0.321      498     
ana:all0638 two-component hybrid sensor and regulator              820      733     0.322      485     
mlo:mll3725 Hybrid sensory histidine kinase                       1391      728     0.302      562     
tel:tll1367 two-component hybrid sensor and regulator   K11527    1060      710     0.349      392     
bps:BPSS0117 putative histidine kinase/response regulat K07677    1014      707     0.277      646     
fps:FP1471 Probable hybrid two-component system sensor             729      697     0.346      384     
bth:BT_4552 two-component system sensor histidine kinas            635      695     0.297      499     
pde:Pden_0080 PAS/PAC sensor hybrid histidine kinase               779      680     0.264      659     
aor:AO090023000259 unnamed protein product; PAS/PAC dom K19692     708      669     0.312      494     
ani:ANIA_05296 protein tcsA                             K19692     682      668     0.288      556     
xfa:XF_1330 hypothetical protein                                  1197      661     0.330      382     
sme:SM_b20356 putative two-component sensor histidine k            917      647     0.256      683     
bxe:Bxe_B1712 Periplasmic sensor hybrid histidine kinas           1173      643     0.292      445     
rle:RL3591 putative two-component sensor histidine kina           1118      642     0.308      415     
ddd:Dda3937_00193 hybrid sensory histidine kinase, in t K07678     921      638     0.297      482     
bfr:BF4349 two-component system sensor histidine kinase            557      637     0.317      401     
ddi:DDB_G0277883 HisK family protein kinase                       2062      637     0.342      377     
amd:AMED_6787 two-component system sensor kinase                  1546      633     0.338      400     
ncr:NCU02057 autoinducer 2 sensor kinase/phosphatase lu           1387      630     0.284      606     
atu:Atu2418 two component sensor kinase                           1131      629     0.326      368     
fgr:FGSG_07118 hypothetical protein                     K19691    1256      628     0.321      436     
mca:MCA1204 sensory box histidine kinase/response regul           1177      623     0.325      381     
ret:RHE_CH03146 probable two-component sensor histidine           1133      618     0.302      391     
mgr:MGG_11174 sensor protein gacS                       K19691    1307      615     0.285      508     
eba:ebA6890 Two-component regulatory system protein con           1015      615     0.278      565     
mba:Mbar_A1052 sensory transduction histidine kinase              1046      607     0.258      666     
syf:Synpcc7942_1816 periplasmic sensor hybrid histidine            977      605     0.293      485     
rso:RSp1178 probable composite two-component transcript            676      599     0.296      523     
syc:syc0882_c two-component sensor kinase               K11356     754      597     0.345      386     
dra:DR_B0028 sensor histidine kinase/response regulator            577      596     0.331      357     
btk:BT9727_0917 sensor histidine kinase                 K03407     896      589     0.304      411     
ban:BA_0996 sensor histidine kinase/response regulator  K03407     896      586     0.302      411     
cal:CAALFM_C702800WA Nik1p                              K19691    1081      585     0.292      445     
mdm:103456365 ethylene receptor-like                    K14509     741      584     0.304      404     
sma:SAVERM_5564 putative two-component system sensor ki           1383      583     0.317      441     
bce:BC1008 Two component system histidine kinase        K03407     896      581     0.300      413     
bma:BMAA1979 sensory box histidine kinase/response regu            771      570     0.280      522     
acb:A1S_1393 putative two-component sensor kinase                 1154      568     0.293      499     
ksk:KSE_53430 putative two-component hybrid sensor and            1549      563     0.307      475     
aci:ACIAD2501 putative two-component sensor kinase                1154      561     0.280      492     
vvi:100232863 ethylene receptor-like                    K14509     741      559     0.297      404     
cne:CNC03340 protein-histidine kinase, putative         K19691    1383      556     0.291      464     
rcu:8270734 ethylene receptor                           K14509     739      549     0.306      408     
csv:101213479 ethylene receptor 1                       K14509     740      541     0.300      397     
sly:606299 ethylene receptor 2                          K14509     736      538     0.297      401     
ath:AT5G35750 histidine kinase 2                        K14489    1176      538     0.275      443     
sgu:SGLAU_24765 two-component system sensor kinase                1820      528     0.286      479     
vg:41332344 Feldmannia irregularis virus a; FirrV-1-F1             582      516     0.297      391     
sco:SCO7327 putative two-component system sensory histi           1331      515     0.313      390     
tde:TDE_2502 sensor histidine kinase/response regulator            676      512     0.267      420     
mtr:11434695 ethylene receptor                          K14509     741      509     0.297      401     
cit:102578063 ethylene response 1 isoform X1            K14509     740      508     0.293      406     
gmx:100795340 ethylene receptor isoform X1              K14509     739      504     0.282      401     
sct:SCAT_p0579 Sensor protein                                     1320      500     0.308      402     
osa:4333916 probable histidine kinase 4                 K14489    1005      498     0.267      561     
zma:732835 histidine kinase                             K14489     996      492     0.284      468     
sgr:SGR_1773 putative two-component system sensor kinas           1840      489     0.282      503     
spo:2542119 phosphorelay sensor kinase Mak1                       1639      488     0.276      413     
cac:CA_C0903 Sensory transduction histidine kinase                 683      483     0.279      409     
rha:RHA1_ro02921 probable response regulator                       740      470     0.284      388     
cdf:CD630_15790 Two-component sensor histidine kinase,s            618      463     0.259      359     
cre:CHLRE_02g074150v5 uncharacterized protein                     1501      462     0.347      248     
pti:PHATRDRAFT_55037 sensor kinase protein 3                      1017      456     0.237      552     
tma:TM0853 sensor histidine kinase                      K02484     489      453     0.254      484     
lin:phoR two-component sensor histidine kinase          K07636     591      445     0.252      492     
afu:AF_1483 signal-transducing histidine kinase                    908      437     0.266      410     
bsu:BSU29100 alkaline phosphatase synthesis sensor prot K07636     579      435     0.308      299     
spr:spr1894 Histidine kinase                            K07636     443      430     0.265      373     
spn:SP_2083 sensor histidine kinase PnpS                K07636     443      429     0.265      373     
tth:TT_C0778 sensory transduction histidine kinase                 963      428     0.292      380     
lmo:lmo2500 two-component sensor histidine kinase       K07636     591      427     0.255      495     
bms:BR1606 sensory box histidine kinase                           1035      426     0.271      399     
rpr:RP229 HISTIDINE KINASE SENSOR PROTEIN (barA)        K07716     497      426     0.329      237     
cte:CT0658 sensor histidine kinase                      K02484     399      426     0.263      377     
cbo:CBO2526 two-component sensor kinase                 K07636     569      422     0.279      365     
bmf:BAB1_0640 PAS domain:PAC motif:ATP-binding region,  K07716     783      419     0.310      268     
bme:BMEI1325 sensory transduction protein kinase        K07716     783      419     0.310      268     
mta:Moth_2494 multi-sensor signal transduction histidin K07636     489      414     0.303      264     
bbu:BB_0420 sensory transduction histidine kinase, puta K02489    1494      414     0.255      577     
ser:SERP1255 sensory box histidine kinase PhoR          K07636     565      400     0.249      386     
sao:SAOUHSC_00021 sensory box histidine kinase VicK     K07652     608      397     0.254      425     
sau:SA0018 two-component sensor histidine kinase        K07652     608      397     0.254      425     
mmp:MMP1303 Sensory transduction histidine kinase                  639      387     0.322      236     
lcb:LCABL_10490 Sensor protein (Fragment)               K07636     555      385     0.279      387     
rco:RC0311 histidine kinase sensor protein              K07716     497      385     0.324      244     
cpe:CPE1986 two-component sensor histidine kinase                  678      382     0.228      552     
lla:L0122 sensor protein kinase                         K02484     517      380     0.249      462     
hal:VNG_6035G Htr-like protein                                     917      380     0.251      422     
efa:EF1704 sensory box histidine kinase                 K07636     591      375     0.273      330     
smu:SMU_1516 putative histidine kinase CovS; VicK-like  K07652     450      375     0.245      437     
ftu:FTT_1736c two component sensor protein kdpD         K07646     893      370     0.301      246     
spy:SPy_0529 two-component sensor histidine kinase      K07652     450      368     0.243      407     
ljo:LJ_0066 two-component regulatory system histidine k K07652     616      367     0.229      476     
cdi:DIP0390 Putative two component system sensor kinase K07768     384      365     0.265      321     
hma:pNG7155 HTR-like protein                                       648      361     0.249      381     
hth:HTH_1082 sensor histidine kinase                    K07636     329      360     0.288      260     
tps:THAPSDRAFT_22848 predicted protein                            1074      360     0.243      453     
llm:llmg_1067 Sensor protein kinase kinB                K02484     517      360     0.239      460     
cgl:Cgl0403 Two-component system, sensory transduction  K07768     413      356     0.278      252     
pma:Pro_1121 Signal transduction histidine kinase       K08479     381      350     0.295      261     
mab:MAB_4048c Sensor-like histidine kinase senX3        K07768     493      349     0.278      385     
wol:WD_1284 sensor histidine kinase                     K07716     475      346     0.217      494     
lpl:lp_0037 two-component system histidine protein kina K07652     624      346     0.236      491     
mle:ML2440 probable two-component system sensor histidi K07768     441      345     0.245      375     
hvo:HVO_B0143 receiver/sensor box histidine kinase                 597      344     0.248      435     
msm:MSMEG_0936 sensor histidine kinase SenX3            K07768     384      343     0.240      375     
ctb:CTL0727 two component regulator, histidine kinase   K07710     352      341     0.274      361     
ctr:CT_467 two component system sensor histidine kinase K07710     352      333     0.271      361     
mtu:Rv0490 two component sensor histidine kinase SenX3  K07768     410      327     0.261      280     
mtc:MT0509 sensor histidine kinase SenX3                K07768     410      327     0.261      280     
fnu:FN0586 Two-component sensor kinase czcS                        445      326     0.294      238     
nmr:Nmar_0920 histidine kinase                                     505      325     0.259      232     
cpn:CPn_0584 2-Component Sensor                         K07710     364      325     0.268      381     
mth:MTH_444 sensory transduction histidine kinase                  373      315     0.289      225     
blo:BL0031 histidine kinase sensor of two-component sys K07654     565      289     0.297      259     
kla:KLLA0_A10219g uncharacterized protein               K15859     475      283     0.289      232     
hin:HI_1378 phosphate regulon sensor protein (phoR)     K07636     425      265     0.243      300     
aae:aq_231 histidine kinase sensor protein                         339      261     0.307      212     
ngo:NGO_0176 histidine kinase                           K02484     468      258     0.228      228     
nme:NMB0594 sensor histidine kinase                     K02484     468      258     0.241      228     
sce:YHR206W kinase-regulated stress-responsive transcri K15859     622      240     0.294      153     
hpy:HP_1365 response regulator                          K02483     213      224     0.333      123     
hpj:jhp_1283 putative TRANSCRIPTIONAL REGULATOR         K02483     213      221     0.333      123     
cje:Cj1222c two-component sensor histidine kinase       K02484     396      207     0.247      227     
hdu:HD_1470 sensor kinase CpxA                          K07640     464      205     0.253      229     
mmu:108686 coiled coil domain containing 88A            K25392    1845      172     0.206      340     
mdo:103097610 EF-hand calcium binding domain 13                   2653      170     0.221      730     
mcc:717103 girdin isoform X1                            K25392    2027      162     0.204      339     
tpa:TP_0519 response regulatory protein (atoC)                     458      160     0.221      217     
hsa:55704 coiled-coil and HOOK domain protein 88A       K25392    1871      159     0.204      339     
ssc:100514454 girdin isoform X1                         K25392    1870      156     0.195      339     
dre:282677 branched-chain alpha-ketoacid dehydrogenase  K00905     428      155     0.241      282     
ola:101161766 pyruvate dehydrogenase (acetyl-transferri K12077     405      153     0.279      136     
bta:524075 pyruvate dehydrogenase kinase, isozyme 2 iso K00898     343      151     0.233      176     
fca:101100013 pyruvate dehydrogenase kinase, isozyme 2  K00898     407      150     0.239      176     
xtr:448511 pyruvate dehydrogenase kinase 4              K00898     404      149     0.257      148     
rno:81530 pyruvate dehydrogenase kinase, isozyme 2      K00898     407      148     0.246      175     
ocu:100348343 pyruvate dehydrogenase kinase, isozyme 2  K00898     407      147     0.237      173     
cfa:491075 pyruvate dehydrogenase kinase, isozyme 2 iso K00898     415      147     0.237      177     
ecb:100147514 pyruvate dehydrogenase kinase, isozyme 2  K00898     407      145     0.233      176     
gga:425972 pyruvate dehydrogenase kinase, isozyme 1     K12077     408      145     0.248      129     
tko:TK0633 chemotaxis protein-glutamate methylesterase, K03412     355      140     0.305      118     
tbr:Tb927.4.840 hypothetical protein, conserved                    412      135     0.201      394     
xla:379789 pyruvate dehydrogenase kinase 2              K00898     404      135     0.257      148     
bmor:692807 elongation factor Tu                        K02358     465      129     0.195      210     
aag:5569118 pyruvate dehydrogenase (acetyl-transferring K00898     411      129     0.263      156     
dme:Dmel_CG8808 pyruvate dehydrogenase kinase, isoform  K00898     413      129     0.296      81      
aga:1279699 pyruvate dehydrogenase (acetyl-transferring K00898     399      126     0.263      156     
sso:SSO1144 ABC transporter, ATP binding protein        K01990     275      126     0.261      238     
ame:410424 pyruvate dehydrogenase (acetyl-transferring) K00898     416      125     0.211      265     
tca:656781 alcohol dehydrogenase [acceptor]                        604      125     0.210      338     
sai:Saci_1699 ABC transporter, ATP binding protein      K01990     283      123     0.246      224     
pai:PAE2740 paREP5a                                                153      114     0.318      129     

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