KEGG   DISEASE: Renal cell carcinoma
Entry
H00021                      Disease                                
Name
Renal cell carcinoma
Description
Renal cell cancer (RCC) accounts for ~3% of human malignancies and its incidence appears to be rising. Although most cases of RCC seem to occur sporadically, an inherited predisposition to renal cancer accounts for 1-4% of cases. RCC is not a single disease, it has several morphological subtypes. Conventional RCC (clear cell RCC) accounts for ~80% of cases, followed by papillary RCC (10-15%), chromophobe RCC (5%), and collecting duct RCC (<1%). Genes potentially involved in sporadic neoplasms of each particular type are VHL, MET, BHD, and FH respectively. In the absence of VHL, hypoxia-inducible factor alpha (HIF-alpha) accumulates, leading to production of several growth factors, including vascular endothelial growth factor and platelet-derived growth factor. Activated MET mediates a number of biological effects including motility, invasion of extracellular matrix, cellular transformation, prevention of apoptosis and metastasis formation. Loss of functional FH leads to accumulation of fumarate in the cell, triggering inhibition of HPH and preventing targeted pVHL-mediated degradation of HIF-alpha. BHD mutations cause the Birt-Hogg-Dube syndrome and its associated chromophobe, hybrid oncocytic, and conventional (clear cell) RCC.
Category
Cancer
Brite
Human diseases in ICD-11 classification [BR:br08403]
 02 Neoplasms
  Malignant neoplasms, except primary neoplasms of lymphoid, haematopoietic, central nervous system or related tissues
   Malignant neoplasms, stated or presumed to be primary, of specified sites, except of lymphoid, haematopoietic, central nervous system or related tissues
    Malignant neoplasms of urinary tract
     2C90  Malignant neoplasms of kidney, except renal pelvis
      H00021  Renal cell carcinoma
Pathway-based classification of diseases [BR:br08402]
 Replication, repair and transcription
  nt06504  Base excision repair
   H00021  Renal cell carcinoma
 Signal transduction
  nt06542  HIF signaling
   H00021  Renal cell carcinoma
Cancer-associated carbohydrates [br08441.html]
 H00021
Disease
pathway
hsa05211  Renal cell carcinoma
Network
nt06264 Renal cell carcinoma
nt06504 Base excision repair
nt06542 HIF signaling
Gene
PRCC-TFE3 (translocation) [HSA:5546 7030] [KO:K13105 K09105]
VHL (germline mutation (VHL disease), somatic mutation) [HSA:7428] [KO:K03871]
MET (germline activating mutation (HPRC), somatic activating mutation) [HSA:4233] [KO:K05099]
FH (germline loss-of-function mutation (HLPCC), LOH, somatic mutation) [HSA:2271] [KO:K01679]
FLCN (germline mutation (Birt-Hogg-Dube syndrome)) [HSA:201163] [KO:K09594]
HNF1A [HSA:6927] [KO:K08036]
HNF1B [HSA:6928] [KO:K08034]
OGG1 [HSA:4968] [KO:K03660]
PBRM1 [HSA:55193] [KO:K11757]
RNF139 [HSA:11236] [KO:K15703]
Drug
Medroxyprogesterone acetate [DR:D00951]
Temsirolimus [DR:D06068]
Everolimus [DR:D02714]
Axitinib [DR:D03218]
Tivozanib hydrochloride [DR:D10190]
Sunitinib malate [DR:D06402]
Sorafenib tosylate [DR:D06272]
Pazopanib hydrochloride [DR:D05380]
Cabozantinib s-malate [DR:D10095]
Lenvatinib mesylate [DR:D09920]
Nivolumab [DR:D10316]
Pembrolizumab [DR:D10574]
Pembrolizumab and berahyaluronidase alfa [DR:D13168]
Avelumab [DR:D10817]
Bevacizumab [DR:D06409]
Ipilimumab [DR:D04603]
Belzutifan [DR:D11954]
Aldesleukin [DR:D00748]
Other DBs
ICD-11: 2C90.0
MeSH: D002292
OMIM: 144700 300854 605074
Reference
PMID:15122209 (VHL, MET, FH, FLCN)
  Authors
Pavlovich CP, Schmidt LS.
  Title
Searching for the hereditary causes of renal-cell carcinoma.
  Journal
Nat Rev Cancer 4:381-93 (2004)
DOI:10.1038/nrc1364
Reference
  Authors
Cohen HT, McGovern FJ.
  Title
Renal-cell carcinoma.
  Journal
N Engl J Med 353:2477-90 (2005)
DOI:10.1056/NEJMra043172
Reference
  Authors
Linehan WM, Zbar B.
  Title
Focus on kidney cancer.
  Journal
Cancer Cell 6:223-8 (2004)
DOI:10.1016/j.ccr.2004.09.006
Reference
PMID:19406209 (PRCC-TFE3)
  Authors
Brenner JC, Chinnaiyan AM
  Title
Translocations in epithelial cancers.
  Journal
Biochim Biophys Acta 1796:201-15 (2009)
DOI:10.1016/j.bbcan.2009.04.005
Reference
  Authors
Prensner JR, Chinnaiyan AM
  Title
Oncogenic gene fusions in epithelial carcinomas.
  Journal
Curr Opin Genet Dev 19:82-91 (2009)
DOI:10.1016/j.gde.2008.11.008
Reference
PMID:15649945 (HNF1A, HNF1B)
  Authors
Rebouissou S, Vasiliu V, Thomas C, Bellanne-Chantelot C, Bui H, Chretien Y, Timsit J, Rosty C, Laurent-Puig P, Chauveau D, Zucman-Rossi J
  Title
Germline hepatocyte nuclear factor 1alpha and 1beta mutations in renal cell carcinomas.
  Journal
Hum Mol Genet 14:603-14 (2005)
DOI:10.1093/hmg/ddi057
Reference
PMID:10987279 (OGG1)
  Authors
Audebert M, Chevillard S, Levalois C, Gyapay G, Vieillefond A, Klijanienko J, Vielh P, El Naggar AK, Oudard S, Boiteux S, Radicella JP
  Title
Alterations of the DNA repair gene OGG1 in human clear cell carcinomas of the kidney.
  Journal
Cancer Res 60:4740-4 (2000)
Reference
PMID:29301960 (PBRM1)
  Authors
Miao D, Margolis CA, Gao W, Voss MH, Li W, Martini DJ, Norton C, Bosse D, Wankowicz SM, Cullen D, Horak C, Wind-Rotolo M, Tracy A, Giannakis M, Hodi FS, Drake CG, Ball MW, Allaf ME, Snyder A, Hellmann MD, Ho T, Motzer RJ, Signoretti S, Kaelin WG Jr, Choueiri TK, Van Allen EM
  Title
Genomic correlates of response to immune checkpoint therapies in clear cell renal cell carcinoma.
  Journal
Science 359:801-806 (2018)
DOI:10.1126/science.aan5951
Reference
PMID:9689122 (RNF139)
  Authors
Gemmill RM, West JD, Boldog F, Tanaka N, Robinson LJ, Smith DI, Li F, Drabkin HA
  Title
The hereditary renal cell carcinoma 3;8 translocation fuses FHIT to a patched-related gene, TRC8.
  Journal
Proc Natl Acad Sci U S A 95:9572-7 (1998)
DOI:10.1073/pnas.95.16.9572
LinkDB

» Japanese version

KEGG   DISEASE: von Hippel-Lindau syndrome
Entry
H00559                      Disease                                
Name
von Hippel-Lindau syndrome
Description
von Hippel-Lindau syndrome is an autosomal dominant disorder associated with tumors in the central nervous system and other organs. The most frequent tumors are cerebellar and retinal haemangioblastomas, pancreatic neuroendocrine tumors, renal cell carcinoma, phaeochromocytoma in the adrenal gland, epididymal cystadenoma, and endolymphatic sac tumors. Germline inactivation of VHL tumor suppressor protein leads to the upregulation of HIF and promotes to carcinogenesis.
Category
Congenital malformation
Brite
Human diseases in ICD-11 classification [BR:br08403]
 20 Developmental anomalies
  Multiple developmental anomalies or syndromes
   LD2D  Phakomatoses or hamartoneoplastic syndromes
    H00559  von Hippel-Lindau syndrome
Pathway-based classification of diseases [BR:br08402]
 Signal transduction
  nt06542  HIF signaling
   H00559  von Hippel-Lindau syndrome
Pathway
hsa04066  HIF-1 signaling pathway
hsa04120  Ubiquitin mediated proteolysis
hsa05211  Renal cell carcinoma
Network
nt06542 HIF signaling
Gene
VHL [HSA:7428] [KO:K03871]
CCND1 [HSA:595] [KO:K04503]
Drug
Belzutifan [DR:D11954]
Other DBs
ICD-11: LD2D.Y
MeSH: D006623
OMIM: 193300
Reference
  Authors
Maher ER, Neumann HP, Richard S
  Title
von Hippel-Lindau disease: a clinical and scientific review.
  Journal
Eur J Hum Genet 19:617-23 (2011)
DOI:10.1038/ejhg.2010.175
Reference
  Authors
Shuin T, Yamasaki I, Tamura K, Okuda H, Furihata M, Ashida S
  Title
Von Hippel-Lindau disease: molecular pathological basis, clinical criteria, genetic testing, clinical features of tumors and treatment.
  Journal
Jpn J Clin Oncol 36:337-43 (2006)
DOI:10.1093/jjco/hyl052
Reference
PMID:15611513 (VHL)
  Authors
Kim WY, Kaelin WG.
  Title
Role of VHL gene mutation in human cancer.
  Journal
J Clin Oncol 22:4991-5004 (2004)
DOI:10.1200/JCO.2004.05.061
Reference
PMID:12097293 (CCND1)
  Authors
Zatyka M, da Silva NF, Clifford SC, Morris MR, Wiesener MS, Eckardt KU, Houlston RS, Richards FM, Latif F, Maher ER
  Title
Identification of cyclin D1 and other novel targets for the von Hippel-Lindau tumor suppressor gene by expression array analysis and investigation of cyclin D1 genotype as a modifier in von Hippel-Lindau disease.
  Journal
Cancer Res 62:3803-11 (2002)
LinkDB

» Japanese version

KEGG   DISEASE: Congenital polycythemia
Entry
H00236                      Disease                                
Name
Congenital polycythemia;
Familial erythrocytosis (ECYT)
Description
Congenital polycythemia or familial erythrocytosis includes a heterogeneous group of disorders with the common characteristic of an absolute increased red cell mass caused by inherited defects in hypoxia sensing. In primary polycythemias there is an innate defect in the hematopoietic progenitors which allows constitutive overproduction whereas in secondary polycythemias normal progenitors are acted on by serum erythropoietin.
Category
Hematologic disease
Brite
Human diseases in ICD-11 classification [BR:br08403]
 03 Diseases of the blood or blood-forming organs
  Anaemias or other erythrocyte disorders
   Polycythaemia
    3A80  Congenital polycythaemia
     H00236  Congenital polycythemia
Pathway-based classification of diseases [BR:br08402]
 Signal transduction
  nt06518  JAK-STAT signaling
   H00236  Congenital polycythemia
  nt06542  HIF signaling
   H00236  Congenital polycythemia
 Cellular processes
  nt06535  Efferocytosis
   H00236  Congenital polycythemia
Pathway
hsa04630  JAK-STAT signaling pathway
hsa04148  Efferocytosis
Network
nt06518 JAK-STAT signaling
nt06535 Efferocytosis
nt06542 HIF signaling
Gene
(ECYT1) EPOR [HSA:2057] [KO:K05079]
(ECYT1) JAK2 [HSA:3717] [KO:K04447]
(ECYT1) SH2B3 [HSA:10019] [KO:K12459]
(ECYT2) VHL [HSA:7428] [KO:K03871]
(ECYT3) EGLN1 [HSA:54583] [KO:K09592]
(ECYT4) EPAS1 [HSA:2034] [KO:K09095]
(ECYT5) EPO [HSA:2056] [KO:K05437]
(ECYT6) HBB [HSA:3043] [KO:K13823]
(ECYT7) HBA1/2 [HSA:3039 3040] [KO:K13822]
(ECYT8) BPGM [HSA:669] [KO:K01837]
Other DBs
ICD-11: 3A80
MeSH: D011086
OMIM: 133100 263400 609820 611783 617907 617980 617981 222800
Reference
PMID:18538455 (ECYT2, ECYT3, ECYT4)
  Authors
Lee FS
  Title
Genetic causes of erythrocytosis and the oxygen-sensing pathway.
  Journal
Blood Rev 22:321-32 (2008)
DOI:10.1016/j.blre.2008.04.003
Reference
PMID:17454194 (ECYT1, ECYT2, ECYT3, ECYT5)
  Authors
Percy MJ
  Title
Genetically heterogeneous origins of idiopathic erythrocytosis.
  Journal
Hematology 12:131-9 (2007)
DOI:10.1080/10245330601111979
Reference
  Authors
Gordeuk VR, Stockton DW, Prchal JT
  Title
Congenital polycythemias/erythrocytoses.
  Journal
Haematologica 90:109-16 (2005)
Reference
PMID:29514032 (ECYT5)
  Authors
Zmajkovic J, Lundberg P, Nienhold R, Torgersen ML, Sundan A, Waage A, Skoda RC
  Title
A Gain-of-Function Mutation in EPO in Familial Erythrocytosis.
  Journal
N Engl J Med 378:924-930 (2018)
DOI:10.1056/NEJMoa1709064
Reference
PMID:17795074 (ECYT6)
  Authors
Stamatoyannopoulos G, Yoshida A, Adamson J, Heinenberg S
  Title
Hemoglobin Rainier (beta145 Tyrosine rarr Histidine): Alkali-Resistant Hemoglobin with Increased Oxygen Affinity.
  Journal
Science 159:741-3 (1968)
DOI:10.1126/science.159.3816.741
Reference
PMID:2227935 (ECYT7)
  Authors
Mamalaki A, Horanyi M, Szelenyi J, Moschonas NK
  Title
Locus assignment of human alpha-globin structural mutants by selective enzymatic amplification of alpha 1 and alpha 2-globin cDNAs.
  Journal
Hum Genet 85:509-12 (1990)
DOI:10.1007/BF00194226
Reference
PMID:15054810 (ECYT8)
  Authors
Hoyer JD, Allen SL, Beutler E, Kubik K, West C, Fairbanks VF
  Title
Erythrocytosis due to bisphosphoglycerate mutase deficiency with concurrent glucose-6-phosphate dehydrogenase (G-6-PD) deficiency.
  Journal
Am J Hematol 75:205-8 (2004)
DOI:10.1002/ajh.20014
LinkDB

» Japanese version

DBGET integrated database retrieval system