KEGG   PATHWAY: aly00710
Entry
aly00710                    Pathway                                
Name
Carbon fixation by Calvin cycle - Arabidopsis lyrata (lyrate rockcress)
Class
Metabolism; Energy metabolism
Pathway map
aly00710  Carbon fixation by Calvin cycle
aly00710

Module
aly_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:aly00710]
aly_M00168  CAM (Crassulacean acid metabolism), dark [PATH:aly00710]
aly_M00169  CAM (Crassulacean acid metabolism), light [PATH:aly00710]
aly_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:aly00710]
aly_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:aly00710]
aly_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:aly00710]
Organism
Arabidopsis lyrata (lyrate rockcress) [GN:aly]
Gene
32283048  rbcL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
110226891  ribulose bisphosphate carboxylase small chain 1B, chloroplastic [KO:K01602] [EC:4.1.1.39]
9306912  ribulose bisphosphate carboxylase small chain 1B, chloroplastic [KO:K01602] [EC:4.1.1.39]
9304848  ribulose bisphosphate carboxylase small chain 1B, chloroplastic [KO:K01602] [EC:4.1.1.39]
9324639  ribulose bisphosphate carboxylase small chain 1A, chloroplastic isoform X1 [KO:K01602] [EC:4.1.1.39]
9318856  phosphoglycerate kinase 1, chloroplastic [KO:K00927] [EC:2.7.2.3]
9325316  phosphoglycerate kinase 3, cytosolic [KO:K00927] [EC:2.7.2.3]
9330626  phosphoglycerate kinase 2, chloroplastic [KO:K00927] [EC:2.7.2.3]
9326068  glyceraldehyde-3-phosphate dehydrogenase GAPC2, cytosolic [KO:K00134] [EC:1.2.1.12]
9325314  glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic [KO:K00134] [EC:1.2.1.12]
9318398  glyceraldehyde-3-phosphate dehydrogenase GAPC1, cytosolic [KO:K00134] [EC:1.2.1.12]
9328964  glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic [KO:K00134] [EC:1.2.1.12]
9326040  glyceraldehyde-3-phosphate dehydrogenase GAPA2, chloroplastic isoform X1 [KO:K05298] [EC:1.2.1.13]
9311398  glyceraldehyde-3-phosphate dehydrogenase GAPA1, chloroplastic isoform X1 [KO:K05298] [EC:1.2.1.13]
9327306  glyceraldehyde-3-phosphate dehydrogenase GAPB, chloroplastic [KO:K05298] [EC:1.2.1.13]
110227833  fructose-bisphosphate aldolase 4, cytosolic [KO:K01623] [EC:4.1.2.13]
9317511  fructose-bisphosphate aldolase 6, cytosolic [KO:K01623] [EC:4.1.2.13]
9312801  fructose-bisphosphate aldolase 3, chloroplastic [KO:K01623] [EC:4.1.2.13]
9303634  fructose-bisphosphate aldolase 5, cytosolic [KO:K01623] [EC:4.1.2.13]
9305677  fructose-bisphosphate aldolase 7, cytosolic [KO:K01623] [EC:4.1.2.13]
9302900  fructose-bisphosphate aldolase 2, chloroplastic [KO:K01623] [EC:4.1.2.13]
9312243  fructose-bisphosphate aldolase 8, cytosolic [KO:K01623] [EC:4.1.2.13]
9314611  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
9330022  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
9314022  fructose-1,6-bisphosphatase 1, chloroplastic [KO:K03841] [EC:3.1.3.11]
9300972  fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
9309039  transketolase, chloroplastic [KO:K00615] [EC:2.2.1.1]
9314416  transketolase-1, chloroplastic [KO:K00615] [EC:2.2.1.1]
9312404  sedoheptulose-1,7-bisphosphatase, chloroplastic [KO:K01100] [EC:3.1.3.37]
110228369  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
9323409  probable ribose-5-phosphate isomerase 1 [KO:K01807] [EC:5.3.1.6]
9301435  probable ribose-5-phosphate isomerase 4, chloroplastic [KO:K01807] [EC:5.3.1.6]
9320537  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
9327029  phosphoribulokinase, chloroplastic [KO:K00855] [EC:2.7.1.19]
9314102  triosephosphate isomerase, cytosolic [KO:K01803] [EC:5.3.1.1]
9314604  triosephosphate isomerase, chloroplastic [KO:K01803] [EC:5.3.1.1]
9320323  LOW QUALITY PROTEIN: ribulose-phosphate 3-epimerase, cytoplasmic isoform [KO:K01783] [EC:5.1.3.1]
9322470  ribulose-phosphate 3-epimerase, cytoplasmic isoform [KO:K01783] [EC:5.1.3.1]
9324027  ribulose-phosphate 3-epimerase, cytoplasmic isoform [KO:K01783] [EC:5.1.3.1]
9300808  ribulose-phosphate 3-epimerase, chloroplastic [KO:K01783] [EC:5.1.3.1]
9309679  uncharacterized protein LOC9309679 [KO:K00616] [EC:2.2.1.2]
9325985  uncharacterized protein LOC9325985 [KO:K00616] [EC:2.2.1.2]
9323269  phosphoenolpyruvate carboxylase 4 [KO:K01595] [EC:4.1.1.31]
9316063  phosphoenolpyruvate carboxylase 2 [KO:K01595] [EC:4.1.1.31]
9327804  phosphoenolpyruvate carboxylase 1 [KO:K01595] [EC:4.1.1.31]
9318970  phosphoenolpyruvate carboxylase 3 [KO:K01595] [EC:4.1.1.31]
9326740  phosphoenolpyruvate carboxylase 4 isoform X1 [KO:K01595] [EC:4.1.1.31]
9322519  aspartate aminotransferase, cytoplasmic isozyme 2 [KO:K14454] [EC:2.6.1.1]
9307962  aspartate aminotransferase, cytoplasmic isozyme 1 [KO:K14454] [EC:2.6.1.1]
9307549  aspartate aminotransferase 3, chloroplastic [KO:K14454] [EC:2.6.1.1]
9301045  phosphoenolpyruvate carboxykinase (ATP) isoform X1 [KO:K01610] [EC:4.1.1.49]
9305033  phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
9324933  alanine aminotransferase 2, mitochondrial isoform X1 [KO:K00814] [EC:2.6.1.2]
9326279  alanine aminotransferase 1, mitochondrial [KO:K00814] [EC:2.6.1.2]
9329338  glutamate--glyoxylate aminotransferase 1 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
9323376  glutamate--glyoxylate aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
9306304  pyruvate, phosphate dikinase 1, chloroplastic isoform X1 [KO:K01006] [EC:2.7.9.1]
9308252  NADP-dependent malic enzyme 3 [KO:K00029] [EC:1.1.1.40]
9320033  NADP-dependent malic enzyme 1 [KO:K00029] [EC:1.1.1.40]
9325390  NADP-dependent malic enzyme 4, chloroplastic [KO:K00029] [EC:1.1.1.40]
9309596  NADP-dependent malic enzyme 2 [KO:K00029] [EC:1.1.1.40]
9300640  malate dehydrogenase [NADP], chloroplastic isoform X1 [KO:K00051] [EC:1.1.1.82]
9317213  aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
9302237  malate dehydrogenase 3, cytoplasmic [KO:K00025] [EC:1.1.1.37]
9299740  malate dehydrogenase 2, cytoplasmic [KO:K00025] [EC:1.1.1.37]
9328278  malate dehydrogenase 1, cytoplasmic [KO:K00025] [EC:1.1.1.37]
9314701  malate dehydrogenase 1, peroxisomal isoform X1 [KO:K00026] [EC:1.1.1.37]
9318975  malate dehydrogenase 2, mitochondrial isoform X1 [KO:K00026] [EC:1.1.1.37]
9309482  malate dehydrogenase 2, glyoxysomal [KO:K00026] [EC:1.1.1.37]
9311912  malate dehydrogenase, chloroplastic [KO:K00026] [EC:1.1.1.37]
9330491  malate dehydrogenase 1, mitochondrial [KO:K00026] [EC:1.1.1.37]
9319868  NAD-dependent malic enzyme 1, mitochondrial [KO:K00028] [EC:1.1.1.39]
9309009  NAD-dependent malic enzyme 2, mitochondrial [KO:K00028] [EC:1.1.1.39]
Compound
C00001  H2O
C00011  CO2
C00022  Pyruvate
C00036  Oxaloacetate
C00041  L-Alanine
C00049  L-Aspartate
C00074  Phosphoenolpyruvate
C00085  D-Fructose 6-phosphate
C00111  Glycerone phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00149  (S)-Malate
C00197  3-Phospho-D-glycerate
C00199  D-Ribulose 5-phosphate
C00231  D-Xylulose 5-phosphate
C00236  3-Phospho-D-glyceroyl phosphate
C00279  D-Erythrose 4-phosphate
C00354  D-Fructose 1,6-bisphosphate
C00447  Sedoheptulose 1,7-bisphosphate
C01182  D-Ribulose 1,5-bisphosphate
C05382  Sedoheptulose 7-phosphate
Related
pathway
aly00010  Glycolysis / Gluconeogenesis
aly00400  Phenylalanine, tyrosine and tryptophan biosynthesis
aly00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00710   
LinkDB

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