KEGG   PATHWAY: bgy00040
Entry
bgy00040                    Pathway                                
Name
Pentose and glucuronate interconversions - Bacillus glycinifermentans
Class
Metabolism; Carbohydrate metabolism
Pathway map
bgy00040  Pentose and glucuronate interconversions
bgy00040

Module
bgy_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:bgy00040]
Organism
Bacillus glycinifermentans [GN:bgy]
Gene
BGLY_3892  carbohydrate esterase family 8 protein [KO:K01051] [EC:3.1.1.11]
BGLY_1397  pectate lyase [KO:K01728] [EC:4.2.2.2]
BGLY_4478  pel2; Pectate trisaccharide-lyase [KO:K01728] [EC:4.2.2.2]
BGLY_4139  pelC; Pectate lyase C [KO:K19551] [EC:4.2.2.2 4.2.2.10]
BGLY_4227  kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [KO:K01815] [EC:5.3.1.17]
BGLY_4228  kduD; 2-deoxy-D-gluconate 3-dehydrogenase [KO:K00065] [EC:1.1.1.127]
BGLY_3906  uxaC; Uronate isomerase [KO:K01812] [EC:5.3.1.12]
BGLY_3903  tagaturonate reductase [KO:K00041] [EC:1.1.1.58]
BGLY_3902  uxaA; altronate hydrolase [KO:K01685] [EC:4.2.1.7]
BGLY_1357  uxuA1; Mannonate dehydratase 1 [KO:K01686] [EC:4.2.1.8]
BGLY_4199  tuaD; UDP-glucose 6-dehydrogenase TuaD [KO:K00012] [EC:1.1.1.22]
BGLY_4256  UDP-glucose 6-dehydrogenase [KO:K00012] [EC:1.1.1.22]
BGLY_1300  yngB; UTP-glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]
BGLY_4208  gtaB; UTP-glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]
BGLY_2277  araD; L-ribulose-5-phosphate 4-epimerase [KO:K03077] [EC:5.1.3.4]
BGLY_3414  sgaE; L-ribulose-5-phosphate 4-epimerase [KO:K03077] [EC:5.1.3.4]
BGLY_1796  rpe; Ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
BGLY_2278  araA2; L-arabinose isomerase 2 [KO:K01804] [EC:5.3.1.4]
BGLY_3416  araA1; L-arabinose isomerase 1 [KO:K01804] [EC:5.3.1.4]
BGLY_3415  araB; Ribulokinase [KO:K00853] [EC:2.7.1.16]
BGLY_4444  xylB; xylulose kinase [KO:K00854] [EC:2.7.1.17]
BGLY_4445  xylA; Xylose isomerase [KO:K01805] [EC:5.3.1.5]
BGLY_3949  xylose isomerase [KO:K01820] [EC:5.3.1.14 5.3.1.-]
BGLY_3948  yulC; carbohydrate kinase YulC [KO:K00848] [EC:2.7.1.5]
BGLY_0522  hypothetical protein [KO:K09988] [EC:5.3.1.15]
BGLY_0289  ycbD; putative aldehyde dehydrogenase YcbD [KO:K22187] [EC:1.2.1.-]
BGLY_4575  L-fuculose phosphate aldolase [KO:K01628] [EC:4.1.2.17]
Compound
C00022  Pyruvate
C00026  2-Oxoglutarate
C00029  UDP-glucose
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00116  Glycerol
C00167  UDP-glucuronate
C00181  D-Xylose
C00191  D-Glucuronate
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00216  D-Arabinose
C00231  D-Xylulose 5-phosphate
C00259  L-Arabinose
C00266  Glycolaldehyde
C00309  D-Ribulose
C00310  D-Xylulose
C00312  L-Xylulose
C00333  D-Galacturonate
C00379  Xylitol
C00433  2,5-Dioxopentanoate
C00470  Pectate
C00474  Ribitol
C00476  D-Lyxose
C00502  D-Xylonate
C00508  L-Ribulose
C00514  D-Mannonate
C00532  L-Arabitol
C00558  D-Tagaturonate
C00618  3-Dehydro-L-gulonate
C00714  Pectin
C00789  CDP-ribitol
C00800  L-Gulonate
C00817  D-Altronate
C00905  D-Fructuronate
C01068  D-Ribitol 5-phosphate
C01101  L-Ribulose 5-phosphate
C01508  L-Lyxose
C01904  D-Arabitol
C02266  D-Xylonolactone
C02273  Digalacturonate
C02426  L-Glyceraldehyde
C02753  D-Xylono-1,4-lactone
C03033  beta-D-Glucuronoside
C03291  L-Xylulose 5-phosphate
C03826  2-Dehydro-3-deoxy-D-xylonate
C04053  5-Dehydro-4-deoxy-D-glucuronate
C04349  (4S)-4,6-Dihydroxy-2,5-dioxohexanoate
C04575  (4R,5S)-4,5,6-Trihydroxy-2,3-dioxohexanoate
C05385  D-Glucuronate 1-phosphate
C05411  L-Xylonate
C05412  L-Lyxonate
C06118  4-(4-Deoxy-alpha-D-gluc-4-enuronosyl)-D-galacturonate
C06441  L-Xylulose 1-phosphate
C14899  3-Dehydro-L-gulonate 6-phosphate
C15930  L-Galactonate
C20680  2-Dehydro-3-deoxy-L-galactonate
C22337  D-Ribulose 1-phosphate
C22712  4-Deoxy-L-threo-hex-4-enopyranuronate
Reference
PMID:11741871
  Authors
Yew WS, Gerlt JA.
  Title
Utilization of L-ascorbate by Escherichia coli K-12: assignments of functions to products of the yjf-sga and yia-sgb operons.
  Journal
J Bacteriol 184:302-6 (2002)
DOI:10.1128/JB.184.1.302-306.2002
Reference
PMID:15697206
  Authors
Yew WS, Akana J, Wise EL, Rayment I, Gerlt JA
  Title
Evolution of enzymatic activities in the orotidine 5'-monophosphate decarboxylase suprafamily: enhancing the promiscuous D-arabino-hex-3-ulose 6-phosphate synthase reaction catalyzed by 3-keto-L-gulonate 6-phosphate decarboxylase.
  Journal
Biochemistry 44:1807-15 (2005)
DOI:10.1021/bi047815v
Reference
PMID:10572115
  Authors
Yasueda H, Kawahara Y, Sugimoto S.
  Title
Bacillus subtilis yckG and yckF encode two key enzymes of the ribulose monophosphate pathway used by methylotrophs, and yckH is required for their expression.
  Journal
J Bacteriol 181:7154-60 (1999)
DOI:10.1128/JB.181.23.7154-7160.1999
Reference
PMID:10913097
  Authors
Ibanez E, Gimenez R, Pedraza T, Baldoma L, Aguilar J, Badia J
  Title
Role of the yiaR and yiaS genes of Escherichia coli in metabolism of endogenously formed L-xylulose.
  Journal
J Bacteriol 182:4625-7 (2000)
DOI:10.1128/JB.182.16.4625-4627.2000
Reference
PMID:15901685
  Authors
Orita I, Yurimoto H, Hirai R, Kawarabayasi Y, Sakai Y, Kato N
  Title
The archaeon Pyrococcus horikoshii possesses a bifunctional enzyme for formaldehyde fixation via the ribulose monophosphate pathway.
  Journal
J Bacteriol 187:3636-42 (2005)
DOI:10.1128/JB.187.11.3636-3642.2005
Related
pathway
bgy00010  Glycolysis / Gluconeogenesis
bgy00020  Citrate cycle (TCA cycle)
bgy00030  Pentose phosphate pathway
bgy00052  Galactose metabolism
bgy00053  Ascorbate and aldarate metabolism
bgy00500  Starch and sucrose metabolism
bgy00520  Amino sugar and nucleotide sugar metabolism
bgy00561  Glycerolipid metabolism
bgy00562  Inositol phosphate metabolism
bgy00740  Riboflavin metabolism
KO pathway
ko00040   
LinkDB

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