KEGG   PATHWAY: bja00010
Entry
bja00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Bradyrhizobium diazoefficiens USDA 110
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
bja00010  Glycolysis / Gluconeogenesis
bja00010

Module
bja_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:bja00010]
bja_M00002  Glycolysis, core module involving three-carbon compounds [PATH:bja00010]
bja_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:bja00010]
bja_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:bja00010]
Other DBs
GO: 0006096 0006094
Organism
Bradyrhizobium diazoefficiens USDA 110 [GN:bja]
Gene
bll0449  lpdA; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
bll1358  bll1358; ORF_ID:bll1358; putative hydrolase [KO:K20866] [EC:3.1.3.10]
bll1520  bll1520; fructose bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
bll1521  bll1521; ORF_ID:bll1521; putative fructose-1,6-bisphosphate aldolase protein [KO:K01624] [EC:4.1.2.13]
bll1522  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
bll1523  gapA; glyceraldehyde 3-Phosphate Dehydrogenase [KO:K00134] [EC:1.2.1.12]
bll2515  bll2515; ORF_ID:bll2515; similar to pyruvate phosphate dikinase [KO:K01006] [EC:2.7.9.1]
bll2850  bll2850; ORF_ID:bll2850; probable 6-phosphofructokinase (EC 2.7.1.11) [KO:K21071] [EC:2.7.1.11 2.7.1.90]
bll2851  bll2851; ORF_ID:bll2851; hypothetical protein [KO:K01622] [EC:4.1.2.13 3.1.3.11]
bll4101  bll4101; ORF_ID:bll4101; putative NAD-dependent alcohol dehydrogenase (EC 1.1.1.1) [KO:K13953] [EC:1.1.1.1]
bll4778  bll4778; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
bll4779  bll4779; dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
bll4782  pdhB; pyruvate dehydrogenase beta subunit [KO:K00162] [EC:1.2.4.1]
bll4783  pdhA; pyruvate dehydrogenase alpha subunit [KO:K00161] [EC:1.2.4.1]
bll4784  bll4784; aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
bll4794  eno; enolase [KO:K01689] [EC:4.2.1.11]
bll4807  tpiA; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
bll5655  bll5655; alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
bll6322  bll6322; aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
bll6376  bll6376; ORF_ID:bll6376; hypothetical protein [KO:K24012]
bll7367  bll7367; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
bll7607  bll7607; ORF_ID:bll7607; putative aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
bll7898  bll7898; alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
bll7981  bll7981; ORF_ID:bll7981; putative dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
bll8126  bll8126; ORF_ID:bll8126; probable phosphoglucomutase phosphomannomutase protein [KO:K15778] [EC:5.4.2.8 5.4.2.2]
bll8141  pckA; phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
blr0573  blr0573; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
blr0686  blr0686; phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
blr2389  celB; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
blr2538  ppdK; pyruvate,orthophosphate dikinase [KO:K01006] [EC:2.7.9.1]
blr2581  cbbF; ORF_ID:blr2581; putative D-fructose-1,6-bisphosphatase protein [KO:K03841] [EC:3.1.3.11]
blr2584  cbbA; ORF_ID:blr2584; putative fructose-1,6-bisphosphate aldolase protein [KO:K01624] [EC:4.1.2.13]
blr2780  blr2780; ORF_ID:blr2780; probable NAD-dependent alcohol dehydrogenase (EC 1.1.1.1) [KO:K13953] [EC:1.1.1.1]
blr2815  blr2815; ORF_ID:blr2815; putative transketolase family protein [KO:K00163] [EC:1.2.4.1]
blr2816  blr2816; aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
blr3206  blr3206; ORF_ID:blr3206; probable aldose 1-epimerase precursor (EC 5.1.3.3) [KO:K01785] [EC:5.1.3.3]
blr3446  blr3446; ORF_ID:blr3446; probable 6-carboxyhexanoate--COA ligase (EC 6.2.1.14) [KO:K24012]
blr3720  blr3720; ORF_ID:blr3720; probable pyruvate dehydrogenase [KO:K00163] [EC:1.2.4.1]
blr3721  aceF; dihydrolipoamide S-acetyltransferase [KO:K00627] [EC:2.3.1.12]
blr3722  lpd; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
blr3776  betB; betaine aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
blr3958  blr3958; ORF_ID:blr3958; putative acetyl-coenzyme A synthetase (EC 6.2.1.1) [KO:K01895] [EC:6.2.1.1]
blr4363  blr4363; ORF_ID:blr4363; hypothetical protein [KO:K11532] [EC:3.1.3.11 3.1.3.37]
blr4550  blr4550; glucokinase [KO:K00845] [EC:2.7.1.2]
blr4655  ppsA; Phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
blr4658  glk; ORF_ID:blr4658; probable Glucokinase (EC 2.7.1.2) [KO:K00845] [EC:2.7.1.2]
blr4659  blr4659; PfkB family carbohydrate kinase [KO:K16370] [EC:2.7.1.11]
blr4824  blr4824; ORF_ID:blr4824; hypothetical protein [KO:K20866] [EC:3.1.3.10]
blr6070  blr6070; ORF_ID:blr6070; putative alcohol dehydrogenase (EC 1.1.1.1) [KO:K13953] [EC:1.1.1.1]
blr6207  exaA; ORF_ID:blr6207; probable quinoprotein ethanol dehydrogenase precursor (EC 1.1.99.-) [KO:K00114] [EC:1.1.2.8]
blr6215  adhC; alcohol dehydrogenase class III [KO:K00121] [EC:1.1.1.284 1.1.1.1]
blr6334  lpdA; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
blr6743  blr6743; ORF_ID:blr6743; putative ferredoxin oxidoreductase alpha subunit [KO:K00174] [EC:1.2.7.3 1.2.7.11]
blr6744  blr6744; ORF_ID:blr6744; putative ferredoxin oxidoreductase beta subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
blr6758  blr6758; ORF_ID:blr6758; probable transaldolase [KO:K13810] [EC:2.2.1.2 5.3.1.9]
blr7138  pykA; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
blr8272  blr8272; ORF_ID:blr8272; probable phosphoglucomutase phosphomannomutase protein [KO:K15778] [EC:5.4.2.8 5.4.2.2]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
bja00020  Citrate cycle (TCA cycle)
bja00030  Pentose phosphate pathway
bja00500  Starch and sucrose metabolism
bja00620  Pyruvate metabolism
bja00640  Propanoate metabolism
bja00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

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