KEGG   PATHWAY: bsd00630
Entry
bsd00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Blastococcus saxobsidens
Class
Metabolism; Carbohydrate metabolism
Pathway map
bsd00630  Glyoxylate and dicarboxylate metabolism
bsd00630

Module
bsd_M00621  Glycine cleavage system [PATH:bsd00630]
bsd_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:bsd00630]
Other DBs
GO: 0046487 0043648
Organism
Blastococcus saxobsidens [GN:bsd]
Gene
BLASA_0124  glxK; Glycerate kinase [KO:K00865] [EC:2.7.1.165]
BLASA_0277  fadI; 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
BLASA_0318  fdn; Formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
BLASA_0319  fdnG; Formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
BLASA_0322  fdnH; Formate dehydrogenase beta subunit [KO:K00124]
BLASA_0526  acsA; Acetyl-coenzyme A synthetase (Acetate--CoA ligase) (Acyl-activating enzyme) [KO:K01895] [EC:6.2.1.1]
BLASA_0671  citA; putative citrate synthase 2 [KO:K01647] [EC:2.3.3.1]
BLASA_0792  fadA; 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
BLASA_0864  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
BLASA_1970  pccB; Propionyl-CoA carboxylase beta chain [KO:K18472] [EC:6.4.1.2 6.4.1.3 2.1.3.15]
BLASA_2044  glnA; putative glutamine synthetase 2 [KO:K01915] [EC:6.3.1.2]
BLASA_2075  glnA2; Glutamine synthetase I (Glutamate--ammonia ligase I) (GSI) [KO:K01915] [EC:6.3.1.2]
BLASA_2089  bfmBC; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BLASA_2092  gcvT; Aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
BLASA_2336  [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
BLASA_2611  purU; Formyltetrahydrofolate deformylase (Formyl-FH(4) hydrolase) [KO:K01433] [EC:3.5.1.10]
BLASA_2619  gcvH; Glycine cleavage system H-protein [KO:K02437]
BLASA_2624  gcvP; Glycine cleavage system P-protein (glycine dehydrogenase) [KO:K00281] [EC:1.4.4.2]
BLASA_2970  [KO:K01647] [EC:2.3.3.1]
BLASA_3039  fdnH2; Formate dehydrogenase beta subunit [KO:K00124]
BLASA_3040  fdnG2; Formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
BLASA_3041  fdnG3; Formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
BLASA_3094  katA; Catalase [KO:K03781] [EC:1.11.1.6]
BLASA_3197  acnA; aconitate hydratase 1 [KO:K27802]
BLASA_3420  [KO:K17865] [EC:4.2.1.55]
BLASA_3520  glnA3; L-glutamine synthetase [KO:K01915] [EC:6.3.1.2]
BLASA_3601  phbA; acetyl-CoA acetyltransferase with thiolase domain (Acetoacetyl-CoA thiolase) [KO:K00626] [EC:2.3.1.9]
BLASA_3896  [KO:K00626] [EC:2.3.1.9]
BLASA_3897  mce; Methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
BLASA_3911  mutB; Methylmalonyl-CoA mutase large subunit [KO:K14447] [EC:5.4.99.63]
BLASA_3927  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
BLASA_3982  kgd; 2-oxoglutarate decarboxylase [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
BLASA_4149  pccB2; propionyl-CoA carboxylase beta chain [KO:K27094]
BLASA_4150  [KO:K27095]
BLASA_4153  bccA; Acetyl-/propionyl-coenzyme A carboxylase alpha chain [Includes: Biotin carboxylase; Biotin carboxyl carrier protein] [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
BLASA_4172  mutB2; Methylmalonyl-CoA mutase large subunit (MCM-alpha) [KO:K01847] [EC:5.4.99.2]
BLASA_4173  mutA; Methylmalonyl-CoA mutase small subunit [KO:K01847] [EC:5.4.99.2]
BLASA_4209  mdh; Malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
BLASA_4348  mutB3; Methylmalonyl-CoA mutase small subunit [KO:K01849] [EC:5.4.99.2]
BLASA_4349  mutA2; Methylmalonyl-CoA mutase, large subunit [KO:K01848] [EC:5.4.99.2]
BLASA_4376  atoB; Acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BLASA_4667  glcD; Glycolate oxidase subunit [KO:K00104] [EC:1.1.99.14]
BLASA_5067  [KO:K05825] [EC:2.6.1.-]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00049  L-Aspartate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C05840  Iminoaspartate
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C19838  D-erythro-3-Hydroxyaspartate
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
bsd00010  Glycolysis / Gluconeogenesis
bsd00020  Citrate cycle (TCA cycle)
bsd00030  Pentose phosphate pathway
bsd00053  Ascorbate and aldarate metabolism
bsd00071  Fatty acid degradation
bsd00230  Purine metabolism
bsd00250  Alanine, aspartate and glutamate metabolism
bsd00260  Glycine, serine and threonine metabolism
bsd00270  Cysteine and methionine metabolism
bsd00620  Pyruvate metabolism
bsd00710  Carbon fixation by Calvin cycle
bsd00750  Vitamin B6 metabolism
bsd00910  Nitrogen metabolism
KO pathway
ko00630   

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