KEGG   PATHWAY: bub00010
Entry
bub00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Burkholderia ubonensis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
bub00010  Glycolysis / Gluconeogenesis
bub00010

Module
bub_M00002  Glycolysis, core module involving three-carbon compounds [PATH:bub00010]
bub_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:bub00010]
bub_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:bub00010]
Other DBs
GO: 0006096 0006094
Organism
Burkholderia ubonensis [GN:bub]
Gene
BW23_781  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
BW23_4310  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
BW23_3074  phosphoglucose isomerase family protein [KO:K01810] [EC:5.3.1.9]
BW23_721  fructose-1-6-bisphosphatase family protein [KO:K03841] [EC:3.1.3.11]
BW23_3484  fructose-bisphosphate aldolase class-I family protein [KO:K01623] [EC:4.1.2.13]
BW23_2268  fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype [KO:K01624] [EC:4.1.2.13]
BW23_2610  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
BW23_1099  gap; glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
BW23_2266  phosphoglycerate kinase family protein [KO:K00927] [EC:2.7.2.3]
BW23_2027  gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
BW23_1050  histidine phosphatase super family protein [KO:K15634] [EC:5.4.2.11]
BW23_2809  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
BW23_2267  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
BW23_2995  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
BW23_2779  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
BW23_2780  aceF; dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
BW23_237  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BW23_2781  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BW23_5911  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BW23_2290  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
BW23_5205  adhA; alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
BW23_6087  zinc-binding alcohol dehydrogenase family protein [KO:K13953] [EC:1.1.1.1]
BW23_1780  zinc-binding dehydrogenase family protein [KO:K13979] [EC:1.1.1.2]
BW23_3523  PQQ-dependent dehydrogenase, methanol/ethanol family protein [KO:K00114] [EC:1.1.2.8]
BW23_5268  cytochrome c family protein [KO:K22474] [EC:1.1.5.5]
BW23_5037  cytochrome c family protein [KO:K22474] [EC:1.1.5.5]
BW23_2466  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
BW23_5972  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
BW23_3223  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
BW23_1578  acoD; acetaldehyde dehydrogenase 2 [KO:K00138] [EC:1.2.1.-]
BW23_5613  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
BW23_2675  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
BW23_6237  AMP-binding enzyme family protein [KO:K01895] [EC:6.2.1.1]
BW23_3395  AMP-binding enzyme family protein [KO:K01895] [EC:6.2.1.1]
BW23_403  AMP-binding enzyme family protein [KO:K01895] [EC:6.2.1.1]
BW23_1112  aldose 1-epimerase family protein [KO:K01785] [EC:5.1.3.3]
BW23_6291  aldose 1-epimerase family protein [KO:K01785] [EC:5.1.3.3]
BW23_4927  HAD hydrolase, IA, variant 3 family protein [KO:K20866] [EC:3.1.3.10]
BW23_833  phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein [KO:K15778] [EC:5.4.2.8 5.4.2.2]
BW23_4245  aldehyde dehydrogenase family protein [KO:K00131] [EC:1.2.1.9]
BW23_5194  phosphoenolpyruvate carboxykinase family protein [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
bub00020  Citrate cycle (TCA cycle)
bub00030  Pentose phosphate pathway
bub00500  Starch and sucrose metabolism
bub00620  Pyruvate metabolism
bub00640  Propanoate metabolism
bub00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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