KEGG   PATHWAY: cbv00230
Entry
cbv00230                    Pathway                                
Name
Purine metabolism - Clostridium baratii
Class
Metabolism; Nucleotide metabolism
Pathway map
cbv00230  Purine metabolism
cbv00230

Module
cbv_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:cbv00230]
cbv_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:cbv00230]
cbv_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:cbv00230]
cbv_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:cbv00230]
cbv_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:cbv00230]
Other DBs
GO: 0006163 0042278
Organism
Clostridium baratii [GN:cbv]
Gene
U729_1065  purA; adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
U729_1235  nrdD; anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
U729_1252  [KO:K03783] [EC:2.4.2.1]
U729_1258  prs; ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
U729_1280  hpt; hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
U729_1367  [KO:K00939] [EC:2.7.4.3]
U729_1392  [KO:K00525] [EC:1.17.4.1]
U729_1393  nrdB; ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
U729_1489  guaB; inosine-5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
U729_1490  guaA; GMP synthase [KO:K01951] [EC:6.3.5.2]
U729_1516  rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family [KO:K01519] [EC:3.6.1.66]
U729_1844  [KO:K01515] [EC:3.6.1.13 3.6.1.-]
U729_2040  [KO:K01524] [EC:3.6.1.11 3.6.1.40]
U729_2108  [KO:K01952] [EC:6.3.5.3]
U729_2109  purE; N5-carboxyaminoimidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
U729_2110  purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
U729_2111  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
U729_2112  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
U729_2113  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
U729_2114  purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
U729_2115  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
U729_2172  [KO:K01119] [EC:3.1.4.16 3.1.3.6]
U729_2321  deoD; purine nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
U729_235  prs; ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
U729_2628  [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
U729_2675  [KO:K01515] [EC:3.6.1.13 3.6.1.-]
U729_27  dgt; dGTPase family protein [KO:K01129] [EC:3.1.5.1]
U729_273  deoB; phosphopentomutase [KO:K01839] [EC:5.4.2.7]
U729_2768  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
U729_2849  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
U729_2882  pgcA; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
U729_2925  [KO:K07816] [EC:2.7.6.5]
U729_3017  [KO:K01139] [EC:2.7.6.5 3.1.7.2]
U729_3018  apt; adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
U729_3034  add; adenosine deaminase [KO:K01488] [EC:3.5.4.4]
U729_3046  hpt; hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
U729_3059  ndk; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
U729_409  [KO:K05873] [EC:4.6.1.1]
U729_486  [KO:K07816] [EC:2.7.6.5]
U729_990  xpt; xanthine phosphoribosyltransferase [KO:K03816] [EC:2.4.2.22]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
cbv00030  Pentose phosphate pathway
cbv00220  Arginine biosynthesis
cbv00250  Alanine, aspartate and glutamate metabolism
cbv00260  Glycine, serine and threonine metabolism
cbv00340  Histidine metabolism
cbv00630  Glyoxylate and dicarboxylate metabolism
cbv00730  Thiamine metabolism
cbv00740  Riboflavin metabolism
cbv00790  Folate biosynthesis
KO pathway
ko00230   

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