KEGG   PATHWAY: ccx00630
Entry
ccx00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Corallococcus coralloides
Class
Metabolism; Carbohydrate metabolism
Pathway map
ccx00630  Glyoxylate and dicarboxylate metabolism
ccx00630

Module
ccx_M00012  Glyoxylate cycle [PATH:ccx00630]
ccx_M00621  Glycine cleavage system [PATH:ccx00630]
Other DBs
GO: 0046487 0043648
Organism
Corallococcus coralloides [GN:ccx]
Gene
COCOR_07035  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
COCOR_06380  acsA1; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
COCOR_05520  acsA; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
COCOR_00905  ytcI; AMP-binding protein [KO:K01895] [EC:6.2.1.1]
COCOR_07034  aceB; malate synthase [KO:K01638] [EC:2.3.3.9]
COCOR_04502  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
COCOR_05901  citZ1; citrate synthase [KO:K01647] [EC:2.3.3.1]
COCOR_04524  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
COCOR_07598  citZ; citrate synthase [KO:K01647] [EC:2.3.3.1]
COCOR_01253  acnA; aconitate hydratase [KO:K01681] [EC:4.2.1.3]
COCOR_04192  pcaF; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
COCOR_06717  Acetyl-CoA Acetyltransferase [KO:K00626] [EC:2.3.1.9]
COCOR_01714  fadA; acetyl-CoA acyltransferase [KO:K00626] [EC:2.3.1.9]
COCOR_02169  fadA1; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
COCOR_01074  pccB; propionyl-CoA carboxylase subunit beta [KO:K01966] [EC:6.4.1.3 2.1.3.15]
COCOR_06683  mutA; methylmalonyl-CoA mutase subunit beta [KO:K01847] [EC:5.4.99.2]
COCOR_06684  mutB; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
COCOR_03497  glcD1; FAD/FMN-containing dehydrogenase [KO:K00104] [EC:1.1.99.14]
COCOR_05120  glcD; putative glycolate oxidase, GlcD subunit [KO:K00104] [EC:1.1.99.14]
COCOR_03524  katB; catalase KatB [KO:K03781] [EC:1.11.1.6]
COCOR_01058  katE; catalase HPII [KO:K03781] [EC:1.11.1.6]
COCOR_06739  katA; catalase [KO:K03781] [EC:1.11.1.6]
COCOR_07437  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
COCOR_00572  gph2; HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
COCOR_02265  cbbZ; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
COCOR_04986  gph1; HAD superfamily hydrolase [KO:K01091] [EC:3.1.3.18]
COCOR_07788  class V aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
COCOR_06120  glnA1; glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
COCOR_00825  glnA; glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
COCOR_02630  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
COCOR_05001  gcvP; glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
COCOR_05003  gcvT; glycine cleavage system aminomethyltransferase T [KO:K00605] [EC:2.1.2.10]
COCOR_03717  lpdA; alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
COCOR_05002  gcvH; glycine cleavage system protein H [KO:K02437]
COCOR_06066  glxK; putative glycerate kinase [KO:K00865] [EC:2.7.1.165]
COCOR_08024  fdhA1; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
COCOR_08025  fdhA2; formate dehydrogenase O alpha subunit [KO:K00123] [EC:1.17.1.9]
COCOR_08026  fdnH; formate dehydrogenase, nitrate-inducible, iron-sulfur subunit [KO:K00124]
COCOR_01524  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
COCOR_03330  lcfB2; Long-chain-fatty-acid--CoA ligase [KO:K22133] [EC:6.2.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
ccx00010  Glycolysis / Gluconeogenesis
ccx00020  Citrate cycle (TCA cycle)
ccx00030  Pentose phosphate pathway
ccx00053  Ascorbate and aldarate metabolism
ccx00071  Fatty acid degradation
ccx00230  Purine metabolism
ccx00250  Alanine, aspartate and glutamate metabolism
ccx00260  Glycine, serine and threonine metabolism
ccx00620  Pyruvate metabolism
ccx00750  Vitamin B6 metabolism
ccx00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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