KEGG   PATHWAY: cmao00515
Entry
cmao00515                   Pathway                                
Name
Mannose type O-glycan biosynthesis - Colossoma macropomum (tambaqui)
Description
Biosynthesis of mammalian O-mannosyl glycans is initiated by the transfer of mannose from mannose-P-Dol to serine or threonine residue, followed by extensions with N-acetylglucosamine (GlcNAc) and galactose (Gal) to generate core M1, M2 and M3 glycans. Core M1 and M2 glycans can then be further attached by fucose residues, sialic acid terminals and sulfatded glucuroinc acid terminals. Core M3 glycan is involved in the synthesis of alpha-dystroglycan, a heavily glycosylated protein found in muscle and brain tissues. Core M3 glycan contains a tandem repeat of ribitol 5-phosphate (Rbo5P) and -alpha3-GlcA-beta3-Xyl- repeating structures. Defects of genes encoding core glycans and modified core M3 glycans are associated with various congenital diseases, such as muscular dystrophies caused by reduced O-mannosylation of alpha-dystroglycan in skeletal muscles [DS:H00120].
Class
Metabolism; Glycan biosynthesis and metabolism
Pathway map
cmao00515  Mannose type O-glycan biosynthesis
cmao00515

Other DBs
GO: 0035269
Organism
Colossoma macropomum (tambaqui) [GN:cmao]
Gene
118796678  st3gal3b; ST3 beta-galactoside alpha-2,3-sialyltransferase 3b isoform X1 [KO:K00781] [EC:2.4.3.6]
118797031  [KO:K07632] [EC:2.4.1.-]
118798092  [KO:K19873] [EC:2.7.8.-]
118798306  chst10; carbohydrate sulfotransferase 10 [KO:K09674] [EC:2.8.2.-]
118798925  si:dkey-199f5.8; LOW QUALITY PROTEIN: beta-1,4-galactosyltransferase 3 [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
118801745  b4gat1; beta-1,4-glucuronyltransferase 1 [KO:K21032] [EC:2.4.1.-]
118803454  crppa; D-ribitol-5-phosphate cytidylyltransferase [KO:K21031] [EC:2.7.7.40]
118806077  [KO:K03663] [EC:2.4.1.152]
118806109  zgc:165582; 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9 isoform X1 [KO:K03663] [EC:2.4.1.152]
118807953  [KO:K09661] [EC:2.4.1.-]
118808173  pomgnt1; protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 [KO:K09666] [EC:2.4.1.-]
118808639  st3gal3a; ST3 beta-galactoside alpha-2,3-sialyltransferase 3a isoform X1 [KO:K00781] [EC:2.4.3.6]
118810311  pomk; protein O-mannose kinase [KO:K17547] [EC:2.7.1.183]
118810481  b3gat2; galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2 [KO:K10157] [EC:2.4.1.135]
118810721  b3galnt2; UDP-GalNAc:beta-1, 3-N-acetylgalactosaminyltransferase 2 isoform X1 [KO:K09654] [EC:2.4.1.313]
118812409  [KO:K09668] [EC:2.4.2.- 2.4.1.-]
118812410  [KO:K09668] [EC:2.4.2.- 2.4.1.-]
118813491  [KO:K03663] [EC:2.4.1.152]
118814887  fktn; fukutin [KO:K19872] [EC:2.7.8.-]
118816337  [KO:K03663] [EC:2.4.1.152]
118816979  b4galt1; beta-1,4-galactosyltransferase 1 [KO:K07966] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
118817892  large2; LARGE xylosyl- and glucuronyltransferase 2 [KO:K09668] [EC:2.4.2.- 2.4.1.-]
118818152  rxylt1; ribitol-5-phosphate xylosyltransferase 1 [KO:K21052] [EC:2.4.2.61]
118818315  pomgnt2; protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [KO:K18207] [EC:2.4.1.312]
118818381  b3gat1a; galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 [KO:K00735] [EC:2.4.1.135]
118821225  [KO:K09661] [EC:2.4.1.-]
118821644  b4galt1l; beta-1,4-galactosyltransferase 1 [KO:K07966] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
118822101  b4galt3; beta-1,4-galactosyltransferase 3 [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
118824089  pomt2; protein O-mannosyl-transferase 2 [KO:K00728] [EC:2.4.1.109]
118824091  fut9a; 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9 [KO:K03663] [EC:2.4.1.152]
118825157  [KO:K00735] [EC:2.4.1.135]
118825784  b4galt2; beta-1,4-galactosyltransferase 2 [KO:K07967] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
118827095  pomt1; protein O-mannosyl-transferase 1 [KO:K00728] [EC:2.4.1.109]
Compound
C00063  CTP
C00789  CDP-ribitol
C01068  D-Ribitol 5-phosphate
C02189  [Protein]-L-serine
G10617  Dolichyl phosphate D-mannose
G13026  
G13027  
G13028  
G13082  
G13083  
G13084  O-Mannose core M1
G13085  
G13086  O-Mannose core M2
G13087  
G13088  
G13089  
G13090  
G13091  O-mannose core M3
G13092  Phospho-core M3
G13093  
G13094  
G13095  
G13096  
G13097  
G13098  
G13099  
G13100  
Reference
  Authors
Praissman JL, Wells L
  Title
Mammalian O-mannosylation pathway: glycan structures, enzymes, and protein substrates.
  Journal
Biochemistry 53:3066-78 (2014)
DOI:10.1021/bi500153y
Reference
  Authors
Stalnaker SH, Stuart R, Wells L
  Title
Mammalian O-mannosylation: unsolved questions of structure/function.
  Journal
Curr Opin Struct Biol 21:603-9 (2011)
DOI:10.1016/j.sbi.2011.09.001
Reference
  Authors
Kanagawa M, Kobayashi K, Tajiri M, Manya H, Kuga A, Yamaguchi Y, Akasaka-Manya K, Furukawa J, Mizuno M, Kawakami H, Shinohara Y, Wada Y, Endo T, Toda T
  Title
Identification of a Post-translational Modification with Ribitol-Phosphate and Its Defect in Muscular Dystrophy.
  Journal
Cell Rep 14:2209-23 (2016)
DOI:10.1016/j.celrep.2016.02.017
Reference
  Authors
Manya H, Yamaguchi Y, Kanagawa M, Kobayashi K, Tajiri M, Akasaka-Manya K, Kawakami H, Mizuno M, Wada Y, Toda T, Endo T
  Title
The Muscular Dystrophy Gene TMEM5 Encodes a Ribitol beta1,4-Xylosyltransferase Required for the Functional Glycosylation of Dystroglycan.
  Journal
J Biol Chem 291:24618-24627 (2016)
DOI:10.1074/jbc.M116.751917
Related
pathway
cmao00510  N-Glycan biosynthesis
KO pathway
ko00515   

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