KEGG   PATHWAY: cnn00970
Entry
cnn00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Clostridium neonatale
Class
Genetic Information Processing; Translation
Pathway map
cnn00970  Aminoacyl-tRNA biosynthesis
cnn00970

Organism
Clostridium neonatale [GN:cnn]
Gene
CNEO_0081  ileS; Isoleucine--tRNA ligase (Isoleucyl-tRNA synthetase (IleRS)) [KO:K01870] [EC:6.1.1.5]
CNEO_0096  metG; Methionine--tRNA ligase (Methionyl-tRNA synthetase (MetRS)) [KO:K01874] [EC:6.1.1.10]
CNEO_0123  asnS; Asparagine--tRNA ligase (Asparaginyl-tRNA synthetase) (AsnRS) [KO:K01893] [EC:6.1.1.22]
CNEO_0160  lysS; Lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
CNEO_0161  glyQS; Glycine--tRNA ligase [KO:K01880] [EC:6.1.1.14]
CNEO_0189  proS; Prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
CNEO_0190  cysS; Cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
CNEO_0464  gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
CNEO_0465  gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
CNEO_0466  gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
CNEO_1235  trpS; Tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
CNEO_1365  tyrZ; Tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
CNEO_1694  serS; Serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
CNEO_1914  hisS; Histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
CNEO_1915  aspS; Aspartate--tRNA ligase (Aspartyl-tRNA synthetase) (AspRS) [KO:K01876] [EC:6.1.1.12]
CNEO_2001  valS; Valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
CNEO_2038  hisS; Histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
CNEO_2061  pheS; Phenylalanine--tRNA ligase alpha subunit [KO:K01889] [EC:6.1.1.20]
CNEO_2062  pheT; Phenylalanine--tRNA ligase beta subunit [KO:K01890] [EC:6.1.1.20]
CNEO_2198  aspS; Aspartate--tRNA(Asp/Asn) ligase (Aspartyl-tRNA synthetase) (AspRS) [KO:K09759] [EC:6.1.1.23]
CNEO_2199  gatC; Glutamyl-tRNA(Gln) amidotransferase, subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
CNEO_2200  gatA; Glutamyl-tRNA(Gln) amidotransferase, subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
CNEO_2201  gatB; Glutamyl-tRNA(Gln) amidotransferase, subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
CNEO_2770  lysS; Lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
CNEO_3182  thrS; Threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
CNEO_3380  fmt; Methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
CNEO_3434  alaS; Alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
CNEO_3509  gltX; Glutamate--tRNA ligase (GluRS) [KO:K01885] [EC:6.1.1.17]
CNEO_3515  argS; Arginine--tRNA ligase (ArgRS) [KO:K01887] [EC:6.1.1.19]
CNEO_4165  leuS; Leucine--tRNA ligase (LeuRS) [KO:K01869] [EC:6.1.1.4]
CNEO_4185  tyrS; Tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
CNEO_4399  [KO:K01872] [EC:6.1.1.7]
CNEO_TRNA1  [KO:K14230]
CNEO_TRNA10  [KO:K14230]
CNEO_TRNA11  [KO:K14228]
CNEO_TRNA12  [KO:K14230]
CNEO_TRNA13  [KO:K14230]
CNEO_TRNA14  [KO:K14228]
CNEO_TRNA15  [KO:K14230]
CNEO_TRNA16  [KO:K14228]
CNEO_TRNA17  [KO:K14220]
CNEO_TRNA18  [KO:K14220]
CNEO_TRNA19  [KO:K14220]
CNEO_TRNA2  [KO:K14218]
CNEO_TRNA20  [KO:K14218]
CNEO_TRNA21  [KO:K14227]
CNEO_TRNA22  [KO:K14231]
CNEO_TRNA23  [KO:K14222]
CNEO_TRNA24  [KO:K14234]
CNEO_TRNA25  [KO:K14232]
CNEO_TRNA26  [KO:K14225]
CNEO_TRNA27  [KO:K14219]
CNEO_TRNA28  [KO:K14232]
CNEO_TRNA29  [KO:K14225]
CNEO_TRNA3  [KO:K14233]
CNEO_TRNA30  [KO:K14219]
CNEO_TRNA31  [KO:K14226]
CNEO_TRNA32  [KO:K14223]
CNEO_TRNA33  [KO:K14229]
CNEO_TRNA34  [KO:K14228]
CNEO_TRNA35  [KO:K14225]
CNEO_TRNA36  [KO:K14225]
CNEO_TRNA37  [KO:K14229]
CNEO_TRNA38  [KO:K14223]
CNEO_TRNA39  [KO:K14229]
CNEO_TRNA4  [KO:K14233]
CNEO_TRNA40  [KO:K14228]
CNEO_TRNA41  [KO:K14225]
CNEO_TRNA42  [KO:K14225]
CNEO_TRNA43  [KO:K14219]
CNEO_TRNA44  [KO:K14219]
CNEO_TRNA45  [KO:K14226]
CNEO_TRNA46  [KO:K14223]
CNEO_TRNA47  [KO:K14229]
CNEO_TRNA48  [KO:K14225]
CNEO_TRNA49  [KO:K14225]
CNEO_TRNA5  [KO:K14233]
CNEO_TRNA50  [KO:K14227]
CNEO_TRNA51  [KO:K14220]
CNEO_TRNA52  [KO:K14236]
CNEO_TRNA53  [KO:K14237]
CNEO_TRNA54  [KO:K14234]
CNEO_TRNA55  [KO:K14236]
CNEO_TRNA56  [KO:K14234]
CNEO_TRNA57  [KO:K14236]
CNEO_TRNA58  [KO:K14235]
CNEO_TRNA59  [KO:K14235]
CNEO_TRNA6  [KO:K14233]
CNEO_TRNA60  [KO:K14218]
CNEO_TRNA61  [KO:K14232]
CNEO_TRNA62  [KO:K14224]
CNEO_TRNA63  [KO:K14237]
CNEO_TRNA64  [KO:K14221]
CNEO_TRNA65  [KO:K14234]
CNEO_TRNA66  [KO:K14224]
CNEO_TRNA67  [KO:K14237]
CNEO_TRNA68  [KO:K14221]
CNEO_TRNA69  [KO:K14234]
CNEO_TRNA7  [KO:K14219]
CNEO_TRNA70  [KO:K14224]
CNEO_TRNA71  [KO:K14237]
CNEO_TRNA72  [KO:K14221]
CNEO_TRNA73  [KO:K14219]
CNEO_TRNA74  [KO:K14233]
CNEO_TRNA75  [KO:K14229]
CNEO_TRNA76  [KO:K14229]
CNEO_TRNA77  [KO:K14230]
CNEO_TRNA78  [KO:K14218]
CNEO_TRNA79  [KO:K14231]
CNEO_TRNA8  [KO:K14228]
CNEO_TRNA80  [KO:K14223]
CNEO_TRNA81  [KO:K14228]
CNEO_TRNA82  [KO:K14225]
CNEO_TRNA83  [KO:K14222]
CNEO_TRNA84  [KO:K14228]
CNEO_TRNA85  [KO:K14224]
CNEO_TRNA9  [KO:K14230]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
cnn00250  Alanine, aspartate and glutamate metabolism
cnn00260  Glycine, serine and threonine metabolism
cnn00270  Cysteine and methionine metabolism
cnn00290  Valine, leucine and isoleucine biosynthesis
cnn00300  Lysine biosynthesis
cnn00330  Arginine and proline metabolism
cnn00340  Histidine metabolism
cnn00380  Tryptophan metabolism
cnn00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

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