KEGG   PATHWAY: daq00010
Entry
daq00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Dickeya aquatica
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
daq00010  Glycolysis / Gluconeogenesis
daq00010

Module
daq_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:daq00010]
daq_M00002  Glycolysis, core module involving three-carbon compounds [PATH:daq00010]
daq_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:daq00010]
daq_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:daq00010]
Other DBs
GO: 0006096 0006094
Organism
Dickeya aquatica [GN:daq]
Gene
DAQ1742_04414  glk; Glucokinase [KO:K00845] [EC:2.7.1.2]
DAQ1742_03992  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
DAQ1742_00166  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
DAQ1742_03937  fbp; Fructose-1,6-bisphosphatase, type I [KO:K03841] [EC:3.1.3.11]
DAQ1742_04304  glpX; Fructose-1,6-bisphosphatase [KO:K02446] [EC:3.1.3.11]
DAQ1742_03920  fbaA; Fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
DAQ1742_04308  tpiA; Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
DAQ1742_02275  gapA; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
DAQ1742_03921  pgk; Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
DAQ1742_02958  gpmA; Phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
DAQ1742_03905  ytjC; Phosphoglycerate mutase [KO:K15634] [EC:5.4.2.11]
DAQ1742_03548  eno; Enolase [KO:K01689] [EC:4.2.1.11]
DAQ1742_02756  pykF; Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
DAQ1742_02297  pykA; Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
DAQ1742_02765  ppsA; Phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
DAQ1742_03791  aceE; Pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
DAQ1742_03790  aceF; Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
DAQ1742_03789  lpd; Dihydrolipoamide dehydrogenase / Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex [KO:K00382] [EC:1.8.1.4]
DAQ1742_00787  nifJ; Pyruvate-flavodoxin oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
DAQ1742_02012  adhC; Alcohol dehydrogenase class III; Glutathione-dependent formaldehyde dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
DAQ1742_02254  adhE; Alcohol dehydrogenase; Acetaldehyde dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
DAQ1742_02520  yiaY; Alcohol dehydrogenase [KO:K13954] [EC:1.1.1.1]
DAQ1742_04353  aldB; Aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
DAQ1742_00774  acs; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
DAQ1742_02952  galM; Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
DAQ1742_00032  yihX; Alpha-D-glucose-1-phosphatase [KO:K20866] [EC:3.1.3.10]
DAQ1742_03005  pgm; Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
DAQ1742_02276  yeaD; glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
DAQ1742_04140  pck; Phosphoenolpyruvate carboxykinase [ATP] [KO:K01610] [EC:4.1.1.49]
DAQ1742_02752  arbB; phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
DAQ1742_03635  lfdP; Beta-glucosidase [KO:K01223] [EC:3.2.1.86]
DAQ1742_04444  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
DAQ1742_00486  bglA; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
DAQ1742_00865  crr; PTS system, glucose-specific IIA component [KO:K02777] [EC:2.7.1.-]
DAQ1742_02833  ptsG; PTS system, glucose-specific IIB component / PTS system, glucose-specific IIC component [KO:K02779] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
daq00020  Citrate cycle (TCA cycle)
daq00030  Pentose phosphate pathway
daq00500  Starch and sucrose metabolism
daq00620  Pyruvate metabolism
daq00640  Propanoate metabolism
daq00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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