KEGG   PATHWAY: dau00010
Entry
dau00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Candidatus Desulforudis audaxviator
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
dau00010  Glycolysis / Gluconeogenesis
dau00010

Module
dau_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:dau00010]
dau_M00002  Glycolysis, core module involving three-carbon compounds [PATH:dau00010]
dau_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:dau00010]
dau_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dau00010]
Other DBs
GO: 0006096 0006094
Organism
Candidatus Desulforudis audaxviator [GN:dau]
Gene
Daud_0297  ROK family protein [KO:K25026] [EC:2.7.1.2]
Daud_0299  bifunctional phosphoglucose/phosphomannose isomerase [KO:K15916] [EC:5.3.1.9 5.3.1.8]
Daud_1055  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
Daud_1116  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
Daud_2175  fructose-1,6-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
Daud_1839  protein of unknown function DUF100 [KO:K01622] [EC:4.1.2.13 3.1.3.11]
Daud_0304  Triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
Daud_0302  glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
Daud_0881  glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
Daud_1270  glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
Daud_0303  Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Daud_0305  phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent [KO:K15633] [EC:5.4.2.12]
Daud_1058  proposed homoserine kinase [KO:K15635] [EC:5.4.2.12]
Daud_0306  Phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
Daud_1056  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Daud_1926  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
Daud_1946  Pyruvate, water dikinase [KO:K01007] [EC:2.7.9.2]
Daud_1962  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [KO:K00169] [EC:1.2.7.1]
Daud_1966  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [KO:K00169] [EC:1.2.7.1]
Daud_1965  thiamine pyrophosphate enzyme domain protein TPP-binding [KO:K00170] [EC:1.2.7.1]
Daud_1961  thiamine pyrophosphate enzyme domain protein TPP-binding [KO:K00170] [EC:1.2.7.1]
Daud_1964  pyruvate/ketoisovalerate oxidoreductase, gamma subunit [KO:K00172] [EC:1.2.7.1]
Daud_1963  4Fe-4S ferredoxin, iron-sulfur binding domain protein [KO:K00171] [EC:1.2.7.1]
Daud_2075  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [KO:K00174] [EC:1.2.7.3 1.2.7.11]
Daud_1608  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [KO:K00174] [EC:1.2.7.3 1.2.7.11]
Daud_1607  thiamine pyrophosphate enzyme domain protein TPP-binding [KO:K00175] [EC:1.2.7.3 1.2.7.11]
Daud_1522  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
Daud_2043  iron-containing alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
Daud_1572  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
Daud_0895  ATP-grasp domain protein [KO:K24012] [EC:6.2.1.13]
Daud_1563  Phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
dau00020  Citrate cycle (TCA cycle)
dau00030  Pentose phosphate pathway
dau00500  Starch and sucrose metabolism
dau00620  Pyruvate metabolism
dau00640  Propanoate metabolism
dau00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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