KEGG   PATHWAY: deq00010
Entry
deq00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Devosia sp. H5989
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
deq00010  Glycolysis / Gluconeogenesis
deq00010

Module
deq_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:deq00010]
deq_M00002  Glycolysis, core module involving three-carbon compounds [PATH:deq00010]
deq_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:deq00010]
deq_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:deq00010]
Other DBs
GO: 0006096 0006094
Organism
Devosia sp. H5989 [GN:deq]
Gene
XM25_08580  hypothetical protein [KO:K00845] [EC:2.7.1.2]
XM25_06840  Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
XM25_08590  hypothetical protein [KO:K16370] [EC:2.7.1.11]
XM25_03225  fructose 1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
XM25_05765  glpX; Fructose-1,6-bisphosphatase, GlpX type [KO:K11532] [EC:3.1.3.11 3.1.3.37]
XM25_14340  Fructose-bisphosphate aldolase class I [KO:K01623] [EC:4.1.2.13]
XM25_08595  Fructose-bisphosphate aldolase class I [KO:K11645] [EC:4.1.2.13]
XM25_03240  Fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
XM25_06100  Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
XM25_14325  gapA; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
XM25_14335  pgk; Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
XM25_03235  pgk; Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
XM25_17750  phosphoglyceromutase [KO:K01834] [EC:5.4.2.11]
XM25_06765  eno; Enolase [KO:K01689] [EC:4.2.1.11]
XM25_19310  Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
XM25_08575  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
XM25_06745  Pyruvate dehydrogenase E1 component alpha subunit [KO:K00161] [EC:1.2.4.1]
XM25_06740  Pyruvate dehydrogenase E1 component beta subunit [KO:K00162] [EC:1.2.4.1]
XM25_06735  branched-chain alpha-keto acid dehydrogenasesubunit E2 [KO:K00627] [EC:2.3.1.12]
XM25_17270  Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase [KO:K00382] [EC:1.8.1.4]
XM25_06725  Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex [KO:K00382] [EC:1.8.1.4]
XM25_22390  hydroxyacid dehydrogenase [KO:K13979] [EC:1.1.1.2]
XM25_13135  hypothetical protein [KO:K00114] [EC:1.1.2.8]
XM25_22055  hypothetical protein [KO:K00114] [EC:1.1.2.8]
XM25_04430  hypothetical protein [KO:K00114] [EC:1.1.2.8]
XM25_08630  pyrrolo-quinoline quinone [KO:K00114] [EC:1.1.2.8]
XM25_19245  Aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
XM25_22185  Aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
XM25_10645  Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
XM25_18180  Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
XM25_11470  Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
XM25_20155  Phosphoenolpyruvate carboxykinase [ATP] [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
deq00020  Citrate cycle (TCA cycle)
deq00030  Pentose phosphate pathway
deq00500  Starch and sucrose metabolism
deq00620  Pyruvate metabolism
deq00640  Propanoate metabolism
deq00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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