KEGG   PATHWAY: dme03440
Entry
dme03440                    Pathway                                
Name
Homologous recombination - Drosophila melanogaster (fruit fly)
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
dme03440  Homologous recombination
dme03440

Other DBs
GO: 0000724
Organism
Drosophila melanogaster (fruit fly) [GN:dme]
Gene
Dmel_CG10059  MAGE; MAGE [KO:K22823]
Dmel_CG10123  Top3alpha; topoisomerase 3alpha [KO:K03165] [EC:5.6.2.1]
Dmel_CG10387  tos; tosca [KO:K10746] [EC:3.1.-.-]
Dmel_CG10498  Cdk2; Cyclin-dependent kinase 2, isoform C [KO:K02206] [EC:2.7.11.22]
Dmel_CG10640  Uev1A; Ubiquitin-conjugating enzyme variant 1A, isoform C [KO:K10704]
Dmel_CG10670  Gen; XPG-like endonuclease [KO:K15338] [EC:3.1.-.-]
Dmel_CG10895  lok; loki, isoform A [KO:K06641] [EC:2.7.11.1]
Dmel_CG11156  mus101; mutagen-sensitive 101 [KO:K10728]
Dmel_CG11329  Nse1; Non-SMC element 1, isoform B [KO:K22817] [EC:2.3.2.27]
Dmel_CG11337  PNPase; polynucleotide phosphorylase, isoform E [KO:K00962] [EC:2.7.7.8]
Dmel_CG11482  Mlh1; Mlh1, isoform B [KO:K08734]
Dmel_CG11734  HERC2; HECT and RLD domain containing protein 2 [KO:K10595] [EC:2.3.2.26]
Dmel_CG12018  PolD2; DNA polymerase delta subunit 2 [KO:K02328]
Dmel_CG12936  mms4; methyl methanesulfonate sensitivity 4 [KO:K10882] [EC:3.1.22.-]
Dmel_CG13142  Nse4; Non-SMC element 4, isoform C [KO:K22825]
Dmel_CG13732  qjt; quijote, isoform B [KO:K22756] [EC:2.3.2.-]
Dmel_CG13779  Sem1; suppressor of exocyst mutations 1 [KO:K10881]
Dmel_CG15220  RPA3; replication protein A3, isoform B [KO:K10740]
Dmel_CG1616  dpa; disc proliferation abnormal, isoform B [KO:K02212] [EC:5.6.2.3]
Dmel_CG16928  mre11; meiotic recombination 11 [KO:K10865]
Dmel_CG17161  grp; grapes, isoform A [KO:K02216] [EC:2.7.11.1]
Dmel_CG17509  pds5; precocious dissociation of sisters 5, isoform B [KO:K11267]
Dmel_CG18271  slx1; nuclease slx1 [KO:K15078] [EC:3.6.1.-]
Dmel_CG18319  ben; bendless, isoform B [KO:K10580] [EC:2.3.2.23]
Dmel_CG2412  Rad51D; Rad51 recombinase D [KO:K10871]
Dmel_CG2525  Hus1-like; Hus1-like, isoform B [KO:K10903]
Dmel_CG2990  Dna2; DNA replication helicase/nuclease 2, isoform C [KO:K10742] [EC:5.6.2.3 3.1.-.-]
Dmel_CG3026  mus81; mus81 [KO:K08991] [EC:3.1.22.-]
Dmel_CG31069  spn-D; spindle D [KO:K10870]
Dmel_CG31617  His1:CG31617; histone H1 [KO:K11275]
Dmel_CG31618  His2A:CG31618; histone H2A [KO:K11251]
Dmel_CG3238  Pif1; Pif1 DNA helicase, isoform B [KO:K15255] [EC:5.6.2.3]
Dmel_CG3240  Rad1; radiation insensitive 1 [KO:K02830] [EC:3.1.11.2]
Dmel_CG32438  SMC5; structural maintenance of chromosomes 5, isoform G [KO:K22803]
Dmel_CG3325  spn-B; spindle B [KO:K10880]
Dmel_CG3326  Fign; fidgetin, isoform B [KO:K22766] [EC:5.6.2.-]
Dmel_CG33801  His1:CG33801; histone H1 [KO:K11275]
Dmel_CG33804  His1:CG33804; histone H1 [KO:K11275]
Dmel_CG33807  His1:CG33807; histone H1 [KO:K11275]
Dmel_CG33808  His2A:CG33808; histone H2A [KO:K11251]
Dmel_CG33810  His1:CG33810; histone H1 [KO:K11275]
Dmel_CG33813  His1:CG33813; histone H1 [KO:K11275]
Dmel_CG33814  His2A:CG33814; histone H2A [KO:K11251]
Dmel_CG33816  His1:CG33816; histone H1 [KO:K11275]
Dmel_CG33817  His2A:CG33817; histone H2A [KO:K11251]
Dmel_CG33819  His1:CG33819; histone H1 [KO:K11275]
Dmel_CG33820  His2A:CG33820; histone H2A [KO:K11251]
Dmel_CG33822  His1:CG33822; histone H1 [KO:K11275]
Dmel_CG33823  His2A:CG33823; histone H2A [KO:K11251]
Dmel_CG33825  His1:CG33825; histone H1 [KO:K11275]
Dmel_CG33826  His2A:CG33826; histone H2A [KO:K11251]
Dmel_CG33828  His1:CG33828; histone H1 [KO:K11275]
Dmel_CG33829  His2A:CG33829; histone H2A [KO:K11251]
Dmel_CG33831  His1:CG33831; histone H1 [KO:K11275]
Dmel_CG33832  His2A:CG33832; histone H2A [KO:K11251]
Dmel_CG33834  His1:CG33834; histone H1 [KO:K11275]
Dmel_CG33835  His2A:CG33835; histone H2A [KO:K11251]
Dmel_CG33837  His1:CG33837; histone H1 [KO:K11275]
Dmel_CG33838  His2A:CG33838; histone H2A [KO:K11251]
Dmel_CG33840  His1:CG33840; histone H1 [KO:K11275]
Dmel_CG33841  His2A:CG33841; histone H2A [KO:K11251]
Dmel_CG33843  His1:CG33843; histone H1 [KO:K11275]
Dmel_CG33844  His2A:CG33844; histone H2A [KO:K11251]
Dmel_CG33846  His1:CG33846; histone H1 [KO:K11275]
Dmel_CG33847  His2A:CG33847; histone H2A [KO:K11251]
Dmel_CG33849  His1:CG33849; histone H1 [KO:K11275]
Dmel_CG33850  His2A:CG33850; histone H2A [KO:K11251]
Dmel_CG33852  His1:CG33852; histone H1 [KO:K11275]
Dmel_CG33853  His2A:CG33853; histone H2A [KO:K11251]
Dmel_CG33855  His1:CG33855; histone H1 [KO:K11275]
Dmel_CG33856  His2A:CG33856; histone H2A [KO:K11251]
Dmel_CG33858  His1:CG33858; histone H1 [KO:K11275]
Dmel_CG33859  His2A:CG33859; histone H2A [KO:K11251]
Dmel_CG33861  His1:CG33861; histone H1 [KO:K11275]
Dmel_CG33862  His2A:CG33862; histone H2A [KO:K11251]
Dmel_CG33864  His1:CG33864; histone H1 [KO:K11275]
Dmel_CG33865  His2A:CG33865; histone H2A [KO:K11251]
Dmel_CG3458  Top3beta; topoisomerase 3beta, isoform B [KO:K03165] [EC:5.6.2.1]
Dmel_CG3473  CG3473; uncharacterized protein, isoform B [KO:K10580] [EC:2.3.2.23]
Dmel_CG3736  okr; okra [KO:K10875] [EC:5.6.2.-]
Dmel_CG3945  Rad9; Rad9, isoform B [KO:K10994] [EC:3.1.11.2]
Dmel_CG3975  PolD3; DNA polymerase delta subunit 3, isoform B [KO:K03504]
Dmel_CG4039  Mcm6; minichromosome maintenance 6 [KO:K02542] [EC:5.6.2.3]
Dmel_CG4078  Rtel1; regulator of telomere elongation helicase 1, isoform B [KO:K11136] [EC:5.6.2.3]
Dmel_CG4082  Mcm5; minichromosome maintenance 5 [KO:K02209] [EC:5.6.2.3]
Dmel_CG4206  Mcm3; minichromosome maintenance 3, isoform A [KO:K02541] [EC:5.6.2.3]
Dmel_CG4252  mei-41; meiotic 41 [KO:K06640] [EC:2.7.11.1]
Dmel_CG4337  mtSSB; mitochondrial single stranded DNA-binding protein [KO:K03111]
Dmel_CG4879  RecQ5; RecQ5 helicase, isoform C [KO:K10902] [EC:5.6.2.4]
Dmel_CG4978  Mcm7; minichromosome maintenance 7 [KO:K02210] [EC:5.6.2.3]
Dmel_CG5363  Cdk1; Cyclin-dependent kinase 1 [KO:K02087] [EC:2.7.11.22 2.7.11.23]
Dmel_CG5499  His2Av; histone H2A variant, isoform B [KO:K11251]
Dmel_CG5524  SMC6; structural maintenance of chromosomes 6 [KO:K22804]
Dmel_CG5949  PolD1; DNA polymerase delta subunit 1 [KO:K02327] [EC:2.7.7.7]
Dmel_CG6339  rad50; rad50, isoform D [KO:K10866] [EC:3.6.-.-]
Dmel_CG6535  tefu; telomere fusion [KO:K04728] [EC:2.7.11.1]
Dmel_CG6754  nbs; nbs, isoform D [KO:K10867]
Dmel_CG6920  Blm; bloom syndrome helicase [KO:K10901] [EC:5.6.2.4]
Dmel_CG7003  Msh6; Msh6 [KO:K08737]
Dmel_CG7487  RecQ4; RecQ4 helicase [KO:K10730] [EC:5.6.2.4]
Dmel_CG7538  Mcm2; minichromosome maintenance 2 [KO:K02540] [EC:5.6.2.3]
Dmel_CG7825  Rad17; Rad17 [KO:K06662]
Dmel_CG7922  Fancm; fanconi anemia group M helicase, isoform B [KO:K10896]
Dmel_CG7948  spn-A; spindle A, isoform A [KO:K04482]
Dmel_CG8601  mus312; mutagen-sensitive 312, isoform A [KO:K10484]
Dmel_CG9273  RPA2; replication protein A2, isoform B [KO:K10739]
Dmel_CG9633  RPA1; replication protein A1 [KO:K07466]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
Reference
  Authors
Ayora S, Carrasco B, Cardenas PP, Cesar CE, Canas C, Yadav T, Marchisone C, Alonso JC
  Title
Double-strand break repair in bacteria: a view from Bacillus subtilis.
  Journal
FEMS Microbiol Rev 35:1055-81 (2011)
DOI:10.1111/j.1574-6976.2011.00272.x
Reference
  Authors
Savage KI, Harkin DP
  Title
BRCA1, a 'complex' protein involved in the maintenance of genomic stability.
  Journal
FEBS J 282:630-46 (2015)
DOI:10.1111/febs.13150
Reference
  Authors
Schwertman P, Bekker-Jensen S, Mailand N
  Title
Regulation of DNA double-strand break repair by ubiquitin and ubiquitin-like modifiers.
  Journal
Nat Rev Mol Cell Biol 17:379-94 (2016)
DOI:10.1038/nrm.2016.58
Reference
  Authors
Zhao W, Wiese C, Kwon Y, Hromas R, Sung P
  Title
The BRCA Tumor Suppressor Network in Chromosome Damage Repair by Homologous Recombination.
  Journal
Annu Rev Biochem 88:221-245 (2019)
DOI:10.1146/annurev-biochem-013118-111058
Reference
  Authors
Mota MBS, Carvalho MA, Monteiro ANA, Mesquita RD
  Title
DNA damage response and repair in perspective: Aedes aegypti, Drosophila melanogaster and Homo sapiens.
  Journal
Parasit Vectors 12:533 (2019)
DOI:10.1186/s13071-019-3792-1
Reference
  Authors
Huselid E, Bunting SF
  Title
The Regulation of Homologous Recombination by Helicases.
  Journal
Genes (Basel) 11:genes11050498 (2020)
DOI:10.3390/genes11050498
Reference
  Authors
Kelliher J, Ghosal G, Leung JWC
  Title
New answers to the old RIDDLE: RNF168 and the DNA damage response pathway.
  Journal
FEBS J 289:2467-2480 (2022)
DOI:10.1111/febs.15857
Reference
  Authors
Raimundo L, Calheiros J, Saraiva L
  Title
Exploiting DNA Damage Repair in Precision Cancer Therapy: BRCA1 as a Prime Therapeutic Target.
  Journal
Cancers (Basel) 13:cancers13143438 (2021)
DOI:10.3390/cancers13143438
Reference
  Authors
Bianco PR
  Title
The Role of the RecFOR Complex in Genome Stability.
  Journal
Int J Mol Sci 26:ijms26125441 (2025)
DOI:10.3390/ijms26125441
Reference
  Authors
Greenhough LA, Galanti L, Liang CC, Boulton SJ, West SC
  Title
Cryo-electron microscopic visualization of RAD51 filament assembly and end-capping by XRCC3-RAD51C-RAD51D-XRCC2.
  Journal
Science 391:eaea1546 (2026)
DOI:10.1126/science.aea1546
Related
pathway
dme03450  Non-homologous end-joining
KO pathway
ko03440   

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