KEGG   PATHWAY: dru00010
Entry
dru00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Desulforamulus ruminis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
dru00010  Glycolysis / Gluconeogenesis
dru00010

Module
dru_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:dru00010]
dru_M00002  Glycolysis, core module involving three-carbon compounds [PATH:dru00010]
dru_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:dru00010]
Other DBs
GO: 0006096 0006094
Organism
Desulforamulus ruminis [GN:dru]
Gene
Desru_0609  Hexokinase [KO:K00844] [EC:2.7.1.1]
Desru_0728  phosphoglucose isomerase (PGI) [KO:K01810] [EC:5.3.1.9]
Desru_1354  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
Desru_2175  phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
Desru_3861  phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
Desru_2666  fructose-1,6-bisphosphatase, class II [KO:K02446] [EC:3.1.3.11]
Desru_3142  ketose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
Desru_3713  fructose-1,6-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
Desru_3597  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
Desru_2149  glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
Desru_3599  glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
Desru_3598  Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Desru_3596  phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent [KO:K15633] [EC:5.4.2.12]
Desru_3595  enolase [KO:K01689] [EC:4.2.1.11]
Desru_1355  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Desru_1163  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
Desru_1663  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Desru_2485  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Desru_3401  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Desru_2277  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [KO:K00174] [EC:1.2.7.3 1.2.7.11]
Desru_3047  3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) [KO:K00174] [EC:1.2.7.3 1.2.7.11]
Desru_0099  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [KO:K00174] [EC:1.2.7.3 1.2.7.11]
Desru_0100  thiamine pyrophosphate TPP-binding domain-containing protein [KO:K00175] [EC:1.2.7.3 1.2.7.11]
Desru_2276  2-oxoglutarate synthase [KO:K00175] [EC:1.2.7.3 1.2.7.11]
Desru_3046  thiamine pyrophosphate TPP-binding domain-containing protein [KO:K00175] [EC:1.2.7.3 1.2.7.11]
Desru_2528  Alcohol dehydrogenase GroES domain protein [KO:K00121] [EC:1.1.1.284 1.1.1.1]
Desru_0619  iron-containing alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
Desru_1382  iron-containing alcohol dehydrogenase [KO:K13954] [EC:1.1.1.1]
Desru_3510  Aldehyde Dehydrogenase [KO:K00128] [EC:1.2.1.3]
Desru_0761  acetate/CoA ligase [KO:K01895] [EC:6.2.1.1]
Desru_1440  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
Desru_1724  acetyl coenzyme A synthetase (ADP forming), alpha domain protein [KO:K24012] [EC:6.2.1.13]
Desru_2004  phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
dru00020  Citrate cycle (TCA cycle)
dru00030  Pentose phosphate pathway
dru00500  Starch and sucrose metabolism
dru00620  Pyruvate metabolism
dru00640  Propanoate metabolism
dru00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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