KEGG   PATHWAY: ecob00030
Entry
ecob00030                   Pathway                                
Name
Pentose phosphate pathway - Escherichia coli B C3029
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ecob00030  Pentose phosphate pathway
ecob00030

Module
ecob_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ecob00030]
ecob_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ecob00030]
ecob_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ecob00030]
ecob_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ecob00030]
Other DBs
GO: 0006098
Organism
Escherichia coli B C3029 [GN:ecob]
Gene
C3029_01760  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
C3029_13715  glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
C3029_14300  phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) [KO:K00033] [EC:1.1.1.44 1.1.1.343]
C3029_20945  ribulose phosphate epimerase [KO:K01783] [EC:5.1.3.1]
C3029_16385  transketolase [KO:K00615] [EC:2.2.1.1]
C3029_18365  transketolase [KO:K00615] [EC:2.2.1.1]
C3029_16380  transaldolase [KO:K00616] [EC:2.2.1.2]
C3029_03275  transaldolase [KO:K00616] [EC:2.2.1.2]
C3029_18465  ribose-5-phosphate isomerase [KO:K01807] [EC:5.3.1.6]
C3029_02120  ribose-5-phosphate isomerase [KO:K01808] [EC:5.3.1.6]
C3029_03435  2-deoxyribose-5-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
C3029_00270  ribokinase [KO:K00852] [EC:2.7.1.15]
C3029_20915  mutase [KO:K01839] [EC:5.4.2.7]
C3029_03425  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
C3029_07055  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
C3029_02140  ribose-phosphate pyrophosphokinase [KO:K05774] [EC:2.7.4.23]
C3029_10425  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
C3029_13710  phosphogluconate dehydratase [KO:K01690] [EC:4.2.1.12]
C3029_13705  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
C3029_04370  glucose dehydrogenase [KO:K00117] [EC:1.1.5.2]
C3029_21845  D-glycerate dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
C3029_21205  gntK; gluconate kinase [KO:K00851] [EC:2.7.1.12]
C3029_03035  idnK; gluconate kinase [KO:K00851] [EC:2.7.1.12]
C3029_21680  ketodeoxygluconokinase [KO:K00874] [EC:2.7.1.45]
C3029_14640  fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
C3029_18410  class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
C3029_02860  fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
C3029_18385  fructose 1,6-bisphosphatase [KO:K02446] [EC:3.1.3.11]
C3029_01245  fructose 1,6-bisphosphatase [KO:K02446] [EC:3.1.3.11]
C3029_01200  ATP-dependent 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
C3029_12995  6-phosphofructokinase [KO:K16370] [EC:2.7.1.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
ecob00010  Glycolysis / Gluconeogenesis
ecob00040  Pentose and glucuronate interconversions
ecob00052  Galactose metabolism
ecob00230  Purine metabolism
ecob00240  Pyrimidine metabolism
ecob00340  Histidine metabolism
ecob00630  Glyoxylate and dicarboxylate metabolism
ecob00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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