KEGG   PATHWAY: ehb00240
Entry
ehb00240                    Pathway                                
Name
Pyrimidine metabolism - Empedobacter haloabium
Class
Metabolism; Nucleotide metabolism
Pathway map
ehb00240  Pyrimidine metabolism
ehb00240

Module
ehb_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:ehb00240]
ehb_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ehb00240]
ehb_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ehb00240]
ehb_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ehb00240]
Other DBs
GO: 0006220 0006213
Organism
Empedobacter haloabium [GN:ehb]
Gene
E7V67_000235  pyrC; dihydroorotase [KO:K01465] [EC:3.5.2.3]
E7V67_002655  [KO:K00525] [EC:1.17.4.1]
E7V67_002660  [KO:K00526] [EC:1.17.4.1]
E7V67_002830  pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR [KO:K02825] [EC:2.4.2.9]
E7V67_002835  [KO:K00609] [EC:2.1.3.2]
E7V67_002840  [KO:K01465] [EC:3.5.2.3]
E7V67_003145  pyrE; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
E7V67_003380  udk; uridine kinase [KO:K00876] [EC:2.7.1.48]
E7V67_004520  [KO:K01081] [EC:3.1.3.5]
E7V67_004595  [KO:K16329] [EC:4.2.1.70]
E7V67_004625  deoA; thymidine phosphorylase [KO:K00758] [EC:2.4.2.4]
E7V67_004630  [KO:K01489] [EC:3.5.4.5]
E7V67_004695  [KO:K17722] [EC:1.3.1.1]
E7V67_004700  preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA [KO:K17723] [EC:1.3.1.1]
E7V67_004710  hydA; dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
E7V67_004715  [KO:K06016] [EC:3.5.1.6 3.5.1.87]
E7V67_004730  [KO:K06016] [EC:3.5.1.6 3.5.1.87]
E7V67_005680  pyrF; orotidine-5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
E7V67_006410  cmk; (d)CMP kinase [KO:K00945] [EC:2.7.4.25]
E7V67_007620  [KO:K16066] [EC:1.1.1.381 1.1.1.-]
E7V67_008260  [KO:K07043] [EC:3.6.1.-]
E7V67_009265  carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit [KO:K01956] [EC:6.3.5.5]
E7V67_009270  carB; carbamoyl-phosphate synthase large subunit [KO:K01955] [EC:6.3.5.5]
E7V67_011665  [KO:K00857] [EC:2.7.1.21]
E7V67_012170  ppnN; nucleotide 5'-monophosphate nucleosidase PpnN [KO:K06966] [EC:3.2.2.10 3.2.2.-]
E7V67_012200  [KO:K01119] [EC:3.1.4.16 3.1.3.6]
E7V67_012290  dcd; dCTP deaminase [KO:K01494] [EC:3.5.4.13]
E7V67_012390  [KO:K00560] [EC:2.1.1.45]
E7V67_012480  upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
E7V67_012950  tmk; dTMP kinase [KO:K00943] [EC:2.7.4.9]
E7V67_015420  pyrH; UMP kinase [KO:K09903] [EC:2.7.4.22]
E7V67_016315  [KO:K06952] [EC:3.1.3.89]
E7V67_018945  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
E7V67_018980  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
E7V67_020015  [KO:K01937] [EC:6.3.4.2]
E7V67_020065  [KO:K01119] [EC:3.1.4.16 3.1.3.6]
E7V67_020855  dut; dUTP diphosphatase [KO:K01520] [EC:3.6.1.23]
E7V67_020915  [KO:K00254] [EC:1.3.5.2]
E7V67_021535  [KO:K01485] [EC:3.5.4.1 3.5.4.21]
E7V67_021885  [KO:K06287] [EC:3.6.1.-]
E7V67_023440  [KO:K16904] [EC:3.6.1.12]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
ehb00030  Pentose phosphate pathway
ehb00220  Arginine biosynthesis
ehb00250  Alanine, aspartate and glutamate metabolism
ehb00280  Valine, leucine and isoleucine degradation
ehb00410  beta-Alanine metabolism
KO pathway
ko00240   

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