KEGG   PATHWAY: enf00040
Entry
enf00040                    Pathway                                
Name
Pentose and glucuronate interconversions - Enterobacter sp. FY-07
Class
Metabolism; Carbohydrate metabolism
Pathway map
enf00040  Pentose and glucuronate interconversions
enf00040

Module
enf_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:enf00040]
enf_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:enf00040]
Organism
Enterobacter sp. FY-07 [GN:enf]
Gene
AKI40_0772  Pectinesterase A [KO:K01051] [EC:3.1.1.11]
AKI40_2216  Acyl-CoA thioester hydrolase YbgC [KO:K01051] [EC:3.1.1.11]
AKI40_3762  E.carotovora pectatelyase [KO:K01728] [EC:4.2.2.2]
AKI40_4954  Pectate disaccharide-lyase [KO:K22994] [EC:4.2.2.9]
AKI40_0905  Periplasmic component of the Tol biopolymer transport system [KO:K01730] [EC:4.2.2.6]
AKI40_0911  Periplasmic component of the Tol biopolymer transport system [KO:K01730] [EC:4.2.2.6]
AKI40_0916  kdgF; Pectin degradation protein [KO:K26933] [EC:4.2.99.25]
AKI40_0906  4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [KO:K01815] [EC:5.3.1.17]
AKI40_2737  2-deoxy-D-gluconate 3-dehydrogenase, putative [KO:K00065] [EC:1.1.1.127]
AKI40_0907  2-deoxy-D-gluconate 3-dehydrogenase, putative [KO:K00065] [EC:1.1.1.127]
AKI40_0883  adhA; Glycoside hydrolase family 28 [KO:K01184] [EC:3.2.1.15]
AKI40_0654  uxaC; Uronate isomerase [KO:K01812] [EC:5.3.1.12]
AKI40_2976  Glucuronate isomerase [KO:K01812] [EC:5.3.1.12]
AKI40_3020  Altronate oxidoreductase,UxaB [KO:K00041] [EC:1.1.1.58]
AKI40_0655  Altronate hydrolase UxaA [KO:K01685] [EC:4.2.1.7]
AKI40_1643  uxuA; Mannonate dehydratase [KO:K01686] [EC:4.2.1.8]
AKI40_2975  dehydratase, starvation sensing protein [KO:K08323] [EC:4.2.1.8]
AKI40_3860  putative mandelate racemase / muconate lactonizing enzyme [KO:K08323] [EC:4.2.1.8]
AKI40_2978  Mannitol dehydrogenase family protein [KO:K00040] [EC:1.1.1.57]
AKI40_1766  UDP-Glc-6-dehydrogenase Ugd [KO:K00012] [EC:1.1.1.22]
AKI40_3354  UTP-glucose-1-phosphate uridylyltransferase subunit GalU [KO:K00963] [EC:2.7.7.9]
AKI40_0889  galU; UTP-glucose-1-phosphate uridylyltransferase, GalU protein [KO:K00963] [EC:2.7.7.9]
AKI40_1747  UTP-glucose-1-phosphate uridylyltransferase subunit GalU [KO:K00963] [EC:2.7.7.9]
AKI40_2078  yiaK; Malate/L-lactate dehydrogenase family protein [KO:K08092] [EC:1.1.1.130]
AKI40_2082  Carbohydrate kinase, FGGY-like protein [KO:K00880] [EC:2.7.1.53]
AKI40_2083  sgbH; 3-keto-L-gulonate-6-phosphate decarboxylase SgbH [KO:K03078] [EC:4.1.1.85]
AKI40_2084  Hexulose-6-phosphate isomerase, putative [KO:K03079] [EC:5.1.3.22]
AKI40_2085  sgbE; L-ribulose-5-phosphate 4-epimerase sgbE [KO:K03077] [EC:5.1.3.4]
AKI40_4223  araD; L-ribulose-5-phosphate 4-epimerase sgbE [KO:K03077] [EC:5.1.3.4]
AKI40_0415  Ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
AKI40_4222  araA; L-arabinose isomerase [KO:K01804] [EC:5.3.1.4]
AKI40_4221  araB; Ribulokinase [KO:K00853] [EC:2.7.1.16]
AKI40_0165  xylB; Xylulose kinase [KO:K00854] [EC:2.7.1.17]
AKI40_1547  xylB; Xylulose kinase [KO:K00854] [EC:2.7.1.17]
AKI40_0164  Xylose isomerase [KO:K01805] [EC:5.3.1.5]
AKI40_4878  rhaB; Rhamnulokinase RhaB [KO:K00848] [EC:2.7.1.5]
AKI40_4880  rhaD; ribulose-5-phosphate 4-epimerase-like epimerase and aldolase [KO:K01629] [EC:4.1.2.19]
AKI40_1546  dalD; Mannitol dehydrogenase domain protein [KO:K00007] [EC:1.1.1.11]
AKI40_4594  ATP synthase subunit delta [KO:K09988] [EC:5.3.1.15]
AKI40_0052  Oxidoreductase, zinc-binding [KO:K00008] [EC:1.1.1.14]
AKI40_4380  yjhG; Dehydratase, YjhG/YagF family [KO:K22396] [EC:4.2.1.82]
AKI40_4872  Dihydrodipicolinate synthetase [KO:K22397] [EC:4.1.2.28]
AKI40_4379  yjhH; Dihydrodipicolinate synthase-like [KO:K22397] [EC:4.1.2.28]
AKI40_2546  Pentulose kinase, FGGY family [KO:K00875] [EC:2.7.1.47]
Compound
C00022  Pyruvate
C00026  2-Oxoglutarate
C00029  UDP-glucose
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00116  Glycerol
C00167  UDP-glucuronate
C00181  D-Xylose
C00191  D-Glucuronate
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00216  D-Arabinose
C00231  D-Xylulose 5-phosphate
C00259  L-Arabinose
C00266  Glycolaldehyde
C00309  D-Ribulose
C00310  D-Xylulose
C00312  L-Xylulose
C00333  D-Galacturonate
C00379  Xylitol
C00433  2,5-Dioxopentanoate
C00470  Pectate
C00474  Ribitol
C00476  D-Lyxose
C00502  D-Xylonate
C00508  L-Ribulose
C00514  D-Mannonate
C00532  L-Arabitol
C00558  D-Tagaturonate
C00618  3-Dehydro-L-gulonate
C00714  Pectin
C00789  CDP-ribitol
C00800  L-Gulonate
C00817  D-Altronate
C00905  D-Fructuronate
C01068  D-Ribitol 5-phosphate
C01101  L-Ribulose 5-phosphate
C01508  L-Lyxose
C01904  D-Arabitol
C02266  D-Xylonolactone
C02273  Digalacturonate
C02426  L-Glyceraldehyde
C02753  D-Xylono-1,4-lactone
C03033  beta-D-Glucuronoside
C03291  L-Xylulose 5-phosphate
C03826  2-Dehydro-3-deoxy-D-xylonate
C04053  5-Dehydro-4-deoxy-D-glucuronate
C04349  (4S)-4,6-Dihydroxy-2,5-dioxohexanoate
C04575  (4R,5S)-4,5,6-Trihydroxy-2,3-dioxohexanoate
C05385  D-Glucuronate 1-phosphate
C05411  L-Xylonate
C05412  L-Lyxonate
C06118  4-(4-Deoxy-alpha-D-gluc-4-enuronosyl)-D-galacturonate
C06441  L-Xylulose 1-phosphate
C14899  3-Dehydro-L-gulonate 6-phosphate
C15930  L-Galactonate
C20680  2-Dehydro-3-deoxy-L-galactonate
C22337  D-Ribulose 1-phosphate
C22712  4-Deoxy-L-threo-hex-4-enopyranuronate
Reference
PMID:11741871
  Authors
Yew WS, Gerlt JA.
  Title
Utilization of L-ascorbate by Escherichia coli K-12: assignments of functions to products of the yjf-sga and yia-sgb operons.
  Journal
J Bacteriol 184:302-6 (2002)
DOI:10.1128/JB.184.1.302-306.2002
Reference
PMID:15697206
  Authors
Yew WS, Akana J, Wise EL, Rayment I, Gerlt JA
  Title
Evolution of enzymatic activities in the orotidine 5'-monophosphate decarboxylase suprafamily: enhancing the promiscuous D-arabino-hex-3-ulose 6-phosphate synthase reaction catalyzed by 3-keto-L-gulonate 6-phosphate decarboxylase.
  Journal
Biochemistry 44:1807-15 (2005)
DOI:10.1021/bi047815v
Reference
PMID:10572115
  Authors
Yasueda H, Kawahara Y, Sugimoto S.
  Title
Bacillus subtilis yckG and yckF encode two key enzymes of the ribulose monophosphate pathway used by methylotrophs, and yckH is required for their expression.
  Journal
J Bacteriol 181:7154-60 (1999)
DOI:10.1128/JB.181.23.7154-7160.1999
Reference
PMID:10913097
  Authors
Ibanez E, Gimenez R, Pedraza T, Baldoma L, Aguilar J, Badia J
  Title
Role of the yiaR and yiaS genes of Escherichia coli in metabolism of endogenously formed L-xylulose.
  Journal
J Bacteriol 182:4625-7 (2000)
DOI:10.1128/JB.182.16.4625-4627.2000
Reference
PMID:15901685
  Authors
Orita I, Yurimoto H, Hirai R, Kawarabayasi Y, Sakai Y, Kato N
  Title
The archaeon Pyrococcus horikoshii possesses a bifunctional enzyme for formaldehyde fixation via the ribulose monophosphate pathway.
  Journal
J Bacteriol 187:3636-42 (2005)
DOI:10.1128/JB.187.11.3636-3642.2005
Related
pathway
enf00010  Glycolysis / Gluconeogenesis
enf00020  Citrate cycle (TCA cycle)
enf00030  Pentose phosphate pathway
enf00052  Galactose metabolism
enf00053  Ascorbate and aldarate metabolism
enf00500  Starch and sucrose metabolism
enf00520  Amino sugar and nucleotide sugar metabolism
enf00561  Glycerolipid metabolism
enf00562  Inositol phosphate metabolism
enf00740  Riboflavin metabolism
KO pathway
ko00040   
LinkDB

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