KEGG   PATHWAY: eok00030
Entry
eok00030                    Pathway                                
Name
Pentose phosphate pathway - Escherichia coli O55:H7 CB9615 (EPEC)
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
eok00030  Pentose phosphate pathway
eok00030

Module
eok_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:eok00030]
eok_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:eok00030]
eok_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:eok00030]
eok_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:eok00030]
eok_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:eok00030]
eok_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:eok00030]
eok_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:eok00030]
Other DBs
GO: 0006098
Organism
Escherichia coli O55:H7 CB9615 (EPEC) [GN:eok]
Gene
G2583_0008  talB; Transaldolase 1 [KO:K00616] [EC:2.2.1.2]
G2583_0128  gcd; Quinoprotein glucose dehydrogenase [KO:K00117] [EC:1.1.5.2]
G2583_0849  pgm; Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
G2583_0933  pgl; 6-phosphogluconolactonase [KO:K07404] [EC:3.1.1.31]
G2583_1478  prs; Ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
G2583_2169  pfkB; 6-phosphofructokinase II [KO:K16370] [EC:2.7.1.11]
G2583_2302  eda; KDPG and KHG aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
G2583_2303  edd; Phosphogluconate dehydratase [KO:K01690] [EC:4.2.1.12]
G2583_2304  zwf; Glucose-6-phosphate 1-dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
G2583_2553  gnd; 6-phosphogluconate dehydrogenase, decarboxylating [KO:K00033] [EC:1.1.1.44 1.1.1.343]
G2583_2629  fbaB; Fructose-bisphosphate aldolase class 1 [KO:K11645] [EC:4.1.2.13]
G2583_2986  talA; Transaldolase A [KO:K00616] [EC:2.2.1.2]
G2583_2987  tktB; Transketolase 2 [KO:K00615] [EC:2.2.1.1]
G2583_3569  rpiA; Ribose 5-phosphate isomerase [KO:K01807] [EC:5.3.1.6]
G2583_3579  fbaA; Fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
G2583_3589  yggF; Fructose-1,6-bisphosphatase, class II [KO:K02446] [EC:3.1.3.11]
G2583_3593  tktA; transketolase [KO:K00615] [EC:2.2.1.1]
G2583_4083  rpe; Ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
G2583_4139  gntK; Thermoresistant gluconokinase [KO:K00851] [EC:2.7.1.12]
G2583_4262  kdgK; Ketodeoxygluconokinase [KO:K00874] [EC:2.7.1.45]
G2583_4295  ghrB; 2-ketogluconate reductase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
G2583_4548  rbsK; Ribokinase [KO:K00852] [EC:2.7.1.15]
G2583_4720  pfkA; 6-phosphofructokinase isozyme 1 [KO:K00850] [EC:2.7.1.11]
G2583_4730  glpX; Fructose-1,6-bisphosphatase, class II [KO:K02446] [EC:3.1.3.11]
G2583_4850  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
G2583_4912  [KO:K01624] [EC:4.1.2.13]
G2583_4921  phnN; Phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN [KO:K05774] [EC:2.7.4.23]
G2583_5061  fbp; Fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
G2583_5241  deoC; Deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
G2583_5243  deoB; Phosphopentomutase [KO:K01839] [EC:5.4.2.7]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
eok00010  Glycolysis / Gluconeogenesis
eok00040  Pentose and glucuronate interconversions
eok00052  Galactose metabolism
eok00230  Purine metabolism
eok00240  Pyrimidine metabolism
eok00340  Histidine metabolism
eok00630  Glyoxylate and dicarboxylate metabolism
eok00750  Vitamin B6 metabolism
KO pathway
ko00030   

DBGET integrated database retrieval system