KEGG   PATHWAY: erb00030
Entry
erb00030                    Pathway                                
Name
Pentose phosphate pathway - Erysipelotrichaceae bacterium I46
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
erb00030  Pentose phosphate pathway
erb00030

Module
erb_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:erb00030]
erb_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:erb00030]
erb_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:erb00030]
erb_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:erb00030]
erb_M00345  Formaldehyde assimilation, ribulose monophosphate pathway [PATH:erb00030]
erb_M00580  Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:erb00030]
Other DBs
GO: 0006098
Organism
Erysipelotrichaceae bacterium I46 [GN:erb]
Gene
A4V01_09115  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
A4V01_19340  glucose-6-phosphate isomerase [KO:K06859] [EC:5.3.1.9]
A4V01_19345  glucose-6-phosphate isomerase [KO:K06859] [EC:5.3.1.9]
A4V01_17620  glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
A4V01_17630  hypothetical protein [KO:K07404] [EC:3.1.1.31]
A4V01_21585  NADP-dependent 6-phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
A4V01_21700  6-phosphogluconate dehydrogenase (decarboxylating) [KO:K00033] [EC:1.1.1.44 1.1.1.343]
A4V01_17625  phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) [KO:K00033] [EC:1.1.1.44 1.1.1.343]
A4V01_04865  ribulose phosphate epimerase [KO:K01783] [EC:5.1.3.1]
A4V01_04870  ribulose phosphate epimerase [KO:K01783] [EC:5.1.3.1]
A4V01_00570  ribulose phosphate epimerase [KO:K01783] [EC:5.1.3.1]
A4V01_01300  ribulose phosphate epimerase [KO:K01783] [EC:5.1.3.1]
A4V01_01940  ribulose phosphate epimerase [KO:K01783] [EC:5.1.3.1]
A4V01_08935  ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
A4V01_21770  pentose-5-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
A4V01_05830  transketolase [KO:K00615] [EC:2.2.1.1]
A4V01_05835  transketolase [KO:K00615] [EC:2.2.1.1]
A4V01_03270  transketolase [KO:K00615] [EC:2.2.1.1]
A4V01_03275  alpha-ketoacid dehydrogenase subunit beta [KO:K00615] [EC:2.2.1.1]
A4V01_07715  transketolase [KO:K00615] [EC:2.2.1.1]
A4V01_07720  transketolase [KO:K00615] [EC:2.2.1.1]
A4V01_06245  transaldolase [KO:K00616] [EC:2.2.1.2]
A4V01_03555  transaldolase [KO:K00616] [EC:2.2.1.2]
A4V01_19235  ribose 5-phosphate isomerase A [KO:K01807] [EC:5.3.1.6]
A4V01_17615  ribose 5-phosphate isomerase A [KO:K01807] [EC:5.3.1.6]
A4V01_18835  ribose-5-phosphate isomerase [KO:K01808] [EC:5.3.1.6]
A4V01_02925  ribose 5-phosphate isomerase B [KO:K01808] [EC:5.3.1.6]
A4V01_05815  3-hexulose-6-phosphate synthase [KO:K08093] [EC:4.1.2.43]
A4V01_19475  3-hexulose-6-phosphate synthase [KO:K08093] [EC:4.1.2.43]
A4V01_02795  hypothetical protein [KO:K08093] [EC:4.1.2.43]
A4V01_19470  6-phospho-3-hexuloisomerase [KO:K08094] [EC:5.3.1.27]
A4V01_01275  sugar isomerase [KO:K08094] [EC:5.3.1.27]
A4V01_02800  6-phospho-3-hexuloisomerase [KO:K08094] [EC:5.3.1.27]
A4V01_00915  2-deoxyribose-5-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
A4V01_19355  deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
A4V01_19390  deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
A4V01_19530  2-deoxyribose-5-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
A4V01_15485  2-deoxyribose-5-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
A4V01_00475  deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
A4V01_20790  ribokinase [KO:K00852] [EC:2.7.1.15]
A4V01_16585  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
A4V01_20985  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
A4V01_03310  hypothetical protein [KO:K18237] [EC:5.3.1.29]
A4V01_03935  translation initiation factor aIF-2BII [KO:K18237] [EC:5.3.1.29]
A4V01_02385  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
A4V01_04740  2-dehydro-3-deoxyphosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
A4V01_04815  2-dehydro-3-deoxyphosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
A4V01_04845  ketohydroxyglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
A4V01_00825  ketohydroxyglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
A4V01_06195  2-dehydro-3-deoxyphosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
A4V01_02600  ketohydroxyglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
A4V01_21670  bifunctional 2-keto-4-hydroxyglutarate aldolase/2-keto-3-deoxy-6-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
A4V01_00185  PTS sugar transporter [KO:K17465] [EC:2.7.1.203]
A4V01_04820  PTS mannose/fructose/sorbose transporter subunit IIB [KO:K17465] [EC:2.7.1.203]
A4V01_09745  PTS mannose/fructose/sorbose transporter subunit IIB [KO:K17465] [EC:2.7.1.203]
A4V01_02605  PTS sugar transporter [KO:K17465] [EC:2.7.1.203]
A4V01_02640  PTS mannose/fructose/sorbose transporter subunit IIB [KO:K17465] [EC:2.7.1.203]
A4V01_21605  PTS sugar transporter [KO:K17465] [EC:2.7.1.203]
A4V01_03885  PTS mannose/fructose/sorbose transporter subunit IIB [KO:K17465] [EC:2.7.1.203]
A4V01_01190  PTS mannose/fructose/sorbose transporter subunit IIB [KO:K17465] [EC:2.7.1.203]
A4V01_00635  PTS mannose/fructose/sorbose transporter subunit IIB [KO:K17465] [EC:2.7.1.203]
A4V01_04100  PTS mannose/fructose/sorbose transporter subunit IIB [KO:K17465] [EC:2.7.1.203]
A4V01_21685  PTS sugar transporter subunit IIB [KO:K17465] [EC:2.7.1.203]
A4V01_00180  PTS sorbose transporter subunit IIC [KO:K17466]
A4V01_02610  PTS sugar transporter subunit IIC [KO:K17466]
A4V01_21600  PTS sorbose transporter subunit IIC [KO:K17466]
A4V01_03890  PTS sorbose transporter subunit IIC [KO:K17466]
A4V01_01310  PTS sorbose transporter subunit IIC [KO:K17466]
A4V01_01980  PTS mannose transporter subunit IIA [KO:K17466]
A4V01_21695  PTS sorbose transporter subunit IIC [KO:K17466]
A4V01_18225  PTS N-acetylgalactosamine transporter subunit IID [KO:K17466]
A4V01_00175  PTS sugar transporter subunit IID [KO:K17467]
A4V01_02615  PTS sugar transporter subunit IID [KO:K17467]
A4V01_21595  PTS fructose transporter subunit IID [KO:K17467]
A4V01_03895  PTS mannose transporter subunit IID [KO:K17467]
A4V01_04830  PTS mannose transporter subunit IIA [KO:K17467]
A4V01_01985  PTS mannose transporter subunit IIAB [KO:K17467]
A4V01_21690  PTS mannose transporter subunit IID [KO:K17467]
A4V01_14855  fructose bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
A4V01_04780  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
A4V01_09740  ketose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
A4V01_00610  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
A4V01_05120  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
A4V01_05175  iron ABC transporter substrate-binding protein [KO:K01624] [EC:4.1.2.13]
A4V01_18860  ketose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
A4V01_01020  hypothetical protein [KO:K01624] [EC:4.1.2.13]
A4V01_01025  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
A4V01_01210  iron ABC transporter substrate-binding protein [KO:K01624] [EC:4.1.2.13]
A4V01_05820  hypothetical protein [KO:K01624] [EC:4.1.2.13]
A4V01_01325  ketose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
A4V01_01995  ketose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
A4V01_03235  fructose-1,6-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
A4V01_17895  ketose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
A4V01_09990  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
A4V01_06855  phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
erb00010  Glycolysis / Gluconeogenesis
erb00040  Pentose and glucuronate interconversions
erb00052  Galactose metabolism
erb00230  Purine metabolism
erb00240  Pyrimidine metabolism
erb00340  Histidine metabolism
erb00630  Glyoxylate and dicarboxylate metabolism
erb00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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