KEGG   PATHWAY: hmar00010
Entry
hmar00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Hydrogenovibrio marinus
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
hmar00010  Glycolysis / Gluconeogenesis
hmar00010

Module
hmar_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:hmar00010]
hmar_M00002  Glycolysis, core module involving three-carbon compounds [PATH:hmar00010]
hmar_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:hmar00010]
Other DBs
GO: 0006096 0006094
Organism
Hydrogenovibrio marinus [GN:hmar]
Gene
HVMH_1339  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
HVMH_0747  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
HVMH_1781  pfkA; pyrophosphate--fructose 6-phosphate 1-phosphotransferase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
HVMH_1617  fbp; fructose-1,6-bisphosphatase class 1 [KO:K03841] [EC:3.1.3.11]
HVMH_0300  fba; fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
HVMH_1577  tpiA; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
HVMH_0297  gap; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
HVMH_0298  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
HVMH_2146  gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
HVMH_2089  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
HVMH_1263  eno; enolase [KO:K01689] [EC:4.2.1.11]
HVMH_0299  pykA; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
HVMH_1193  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
HVMH_1392  aceE; pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
HVMH_1391  hypothetical protein [KO:K00627] [EC:2.3.1.12]
HVMH_1390  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HVMH_1613  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HVMH_1154  alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
HVMH_1156  arabinose dehydrogenase [KO:K13979] [EC:1.1.1.2]
HVMH_1127  acsA; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
HVMH_2189  pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
HVMH_2033  phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
HVMH_2247  D-hexose-6-phosphate mutarotase [KO:K01792] [EC:5.1.3.15]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
hmar00020  Citrate cycle (TCA cycle)
hmar00030  Pentose phosphate pathway
hmar00500  Starch and sucrose metabolism
hmar00620  Pyruvate metabolism
hmar00640  Propanoate metabolism
hmar00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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