KEGG   PATHWAY: ido00010
Entry
ido00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Isoptericola dokdonensis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ido00010  Glycolysis / Gluconeogenesis
ido00010

Module
ido_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ido00010]
ido_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ido00010]
ido_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ido00010]
Other DBs
GO: 0006096 0006094
Organism
Isoptericola dokdonensis [GN:ido]
Gene
I598_0102  lpdC; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
I598_0294  aceE; Pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
I598_0334  ppgK_1; Polyphosphate glucokinase [KO:K00886] [EC:2.7.1.63]
I598_0356  aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
I598_0389  glkA; Glucokinase [KO:K25026]
I598_0392  pfp_1; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [KO:K00895] [EC:2.7.1.90]
I598_0628  adh_1; Alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
I598_0728  tpiA; Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
I598_0729  pgk; Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
I598_0730  gapA; Glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
I598_0746  pfp_2; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
I598_0753  pyk; Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
I598_0997  ldh2; L-lactate dehydrogenase 2 [KO:K00016] [EC:1.1.1.27]
I598_1258  nanK; N-acetylmannosamine kinase [KO:K25026]
I598_1268  adh_2; Alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
I598_1403  thcA; EPTC-inducible aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
I598_1607  ppgK_2; Polyphosphate glucokinase [KO:K00886] [EC:2.7.1.63]
I598_1772  pckG; Phosphoenolpyruvate carboxykinase [GTP] [KO:K01596] [EC:4.1.1.32]
I598_1979  acsA; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
I598_2078  fba; Fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
I598_2154  crr; Glucose-specific phosphotransferase enzyme IIA component [KO:K02777] [EC:2.7.1.-]
I598_2191  pgm; Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
I598_2810  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
I598_3035  gpmA_2; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
I598_3230  eno; Enolase [KO:K01689] [EC:4.2.1.11]
I598_3397  galM; Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
ido00020  Citrate cycle (TCA cycle)
ido00030  Pentose phosphate pathway
ido00500  Starch and sucrose metabolism
ido00620  Pyruvate metabolism
ido00640  Propanoate metabolism
ido00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

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