KEGG   PATHWAY: klu00030
Entry
klu00030                    Pathway                                
Name
Pentose phosphate pathway - Kluyvera sp. CRP
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
klu00030  Pentose phosphate pathway
klu00030

Module
klu_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:klu00030]
klu_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:klu00030]
klu_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:klu00030]
klu_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:klu00030]
klu_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:klu00030]
klu_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:klu00030]
klu_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:klu00030]
Other DBs
GO: 0006098
Organism
Kluyvera sp. CRP [GN:klu]
Gene
K7B04_03440  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
K7B04_19645  zwf; glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
K7B04_02350  lactonase family protein [KO:K07404] [EC:3.1.1.31]
K7B04_12640  pgl; 6-phosphogluconolactonase [KO:K07404] [EC:3.1.1.31]
K7B04_20955  gndA; NADP-dependent phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
K7B04_07130  rpe; ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
K7B04_09110  tkt; transketolase [KO:K00615] [EC:2.2.1.1]
K7B04_22180  transketolase family protein [KO:K00615] [EC:2.2.1.1]
K7B04_22185  transketolase [KO:K00615] [EC:2.2.1.1]
K7B04_13425  transketolase [KO:K00615] [EC:2.2.1.1]
K7B04_13430  transketolase [KO:K00615] [EC:2.2.1.1]
K7B04_01485  tal; transaldolase [KO:K00616] [EC:2.2.1.2]
K7B04_09170  rpiA; ribose-5-phosphate isomerase RpiA [KO:K01807] [EC:5.3.1.6]
K7B04_01680  deoC; deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
K7B04_05030  rbsK; ribokinase [KO:K00852] [EC:2.7.1.15]
K7B04_01670  deoB; phosphopentomutase [KO:K01839] [EC:5.4.2.7]
K7B04_12325  pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) [KO:K01835] [EC:5.4.2.2]
K7B04_03105  phnN; ribose 1,5-bisphosphokinase [KO:K05774] [EC:2.7.4.23]
K7B04_18620  prs; ribose-phosphate diphosphokinase [KO:K00948] [EC:2.7.6.1]
K7B04_19640  edd; phosphogluconate dehydratase [KO:K01690] [EC:4.2.1.12]
K7B04_19635  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
K7B04_00790  glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase [KO:K00117] [EC:1.1.5.2]
K7B04_06405  ghrB; glyoxylate/hydroxypyruvate reductase GhrB [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
K7B04_06910  gntK; gluconokinase [KO:K00851] [EC:2.7.1.12]
K7B04_06415  sugar kinase [KO:K00874] [EC:2.7.1.45]
K7B04_06580  sugar kinase [KO:K00874] [EC:2.7.1.45]
K7B04_21210  fbaB; class I fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
K7B04_09145  fbaA; class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
K7B04_02420  fbp; class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
K7B04_05990  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
K7B04_04515  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
K7B04_18390  pfkB; 6-phosphofructokinase II [KO:K16370] [EC:2.7.1.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
klu00010  Glycolysis / Gluconeogenesis
klu00040  Pentose and glucuronate interconversions
klu00052  Galactose metabolism
klu00230  Purine metabolism
klu00240  Pyrimidine metabolism
klu00340  Histidine metabolism
klu00630  Glyoxylate and dicarboxylate metabolism
klu00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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