KEGG   PATHWAY: kpb00030
Entry
kpb00030                    Pathway                                
Name
Pentose phosphate pathway - Klebsiella pneumoniae blaNDM-1
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
kpb00030  Pentose phosphate pathway
kpb00030

Module
kpb_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:kpb00030]
kpb_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:kpb00030]
kpb_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:kpb00030]
kpb_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:kpb00030]
kpb_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:kpb00030]
kpb_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:kpb00030]
kpb_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:kpb00030]
Other DBs
GO: 0006098
Organism
Klebsiella pneumoniae blaNDM-1 [GN:kpb]
Gene
FH42_18395  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
FH42_07925  glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
FH42_24920  6-phosphogluconolactonase [KO:K07404] [EC:3.1.1.31]
FH42_19575  6-phosphogluconolactonase [KO:K07404] [EC:3.1.1.31]
FH42_08605  6-phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
FH42_15115  ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
FH42_24025  transketolase [KO:K00615] [EC:2.2.1.1]
FH42_24030  transketolase [KO:K00615] [EC:2.2.1.1]
FH42_12755  transketolase [KO:K00615] [EC:2.2.1.1]
FH42_10115  transketolase [KO:K00615] [EC:2.2.1.1]
FH42_25170  transketolase [KO:K00615] [EC:2.2.1.1]
FH42_25175  transketolase [KO:K00615] [EC:2.2.1.1]
FH42_20850  transaldolase [KO:K00616] [EC:2.2.1.2]
FH42_10110  transaldolase [KO:K00616] [EC:2.2.1.2]
FH42_12715  ribose 5-phosphate isomerase [KO:K01807] [EC:5.3.1.6]
FH42_04530  deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
FH42_20715  deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
FH42_04665  carbohydrate kinase [KO:K00852] [EC:2.7.1.15]
FH42_17135  ribokinase [KO:K00852] [EC:2.7.1.15]
FH42_04515  carbohydrate kinase [KO:K00852] [EC:2.7.1.15]
FH42_20725  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
FH42_24595  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
FH42_18805  ribose-phosphate pyrophosphokinase [KO:K05774] [EC:2.7.4.23]
FH42_07310  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
FH42_07920  phosphogluconate dehydratase [KO:K01690] [EC:4.2.1.12]
FH42_07915  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
FH42_21495  glucose dehydrogenase [KO:K00117] [EC:1.1.5.2]
FH42_06510  GMC family oxidoreductase [KO:K06151] [EC:1.1.99.3]
FH42_06515  gluconate 2-dehydrogenase [KO:K06152] [EC:1.1.99.3]
FH42_15910  bifunctional glyoxylate/hydroxypyruvate reductase B [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
FH42_15340  gntK; gluconate kinase [KO:K00851] [EC:2.7.1.12]
FH42_15715  ketodeoxygluconokinase [KO:K00874] [EC:2.7.1.45]
FH42_15900  2-dehydro-3-deoxygluconokinase [KO:K00874] [EC:2.7.1.45]
FH42_02155  hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
FH42_08860  fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
FH42_12740  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
FH42_17330  iron ABC transporter substrate-binding protein [KO:K01624] [EC:4.1.2.13]
FH42_22670  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
FH42_19495  fructose 1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
FH42_16355  fructose 1,6-bisphosphatase [KO:K02446] [EC:3.1.3.11]
FH42_17470  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
FH42_17315  permease [KO:K00850] [EC:2.7.1.11]
FH42_07030  6-phosphofructokinase [KO:K16370] [EC:2.7.1.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
kpb00010  Glycolysis / Gluconeogenesis
kpb00040  Pentose and glucuronate interconversions
kpb00052  Galactose metabolism
kpb00230  Purine metabolism
kpb00240  Pyrimidine metabolism
kpb00340  Histidine metabolism
kpb00630  Glyoxylate and dicarboxylate metabolism
kpb00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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