KEGG   PATHWAY: lsd00010
Entry
lsd00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Litorilituus sediminis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
lsd00010  Glycolysis / Gluconeogenesis
lsd00010

Module
lsd_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:lsd00010]
lsd_M00002  Glycolysis, core module involving three-carbon compounds [PATH:lsd00010]
lsd_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:lsd00010]
lsd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:lsd00010]
Other DBs
GO: 0006096 0006094
Organism
Litorilituus sediminis [GN:lsd]
Gene
EMK97_14525  glucokinase [KO:K00845] [EC:2.7.1.2]
EMK97_09470  ROK family protein [KO:K25026] [EC:2.7.1.2]
EMK97_05880  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
EMK97_07170  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
EMK97_15530  ATP-dependent 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
EMK97_09530  class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
EMK97_05750  fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
EMK97_00260  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
EMK97_01920  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
EMK97_01940  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
EMK97_05745  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
EMK97_13400  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
EMK97_15930  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
EMK97_01575  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
EMK97_02845  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
EMK97_10240  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
EMK97_10235  aceF; dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
EMK97_10230  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
EMK97_06445  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
EMK97_18940  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
EMK97_16250  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
EMK97_04665  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
EMK97_04995  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
EMK97_18075  D-hexose-6-phosphate mutarotase [KO:K01792] [EC:5.1.3.15]
EMK97_09440  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
lsd00020  Citrate cycle (TCA cycle)
lsd00030  Pentose phosphate pathway
lsd00500  Starch and sucrose metabolism
lsd00620  Pyruvate metabolism
lsd00640  Propanoate metabolism
lsd00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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