KEGG   PATHWAY: mlk00515
Entry
mlk00515                    Pathway                                
Name
Mannose type O-glycan biosynthesis - Mustela lutreola (European mink)
Description
Biosynthesis of mammalian O-mannosyl glycans is initiated by the transfer of mannose from mannose-P-Dol to serine or threonine residue, followed by extensions with N-acetylglucosamine (GlcNAc) and galactose (Gal) to generate core M1, M2 and M3 glycans. Core M1 and M2 glycans can then be further attached by fucose residues, sialic acid terminals and sulfatded glucuroinc acid terminals. Core M3 glycan is involved in the synthesis of alpha-dystroglycan, a heavily glycosylated protein found in muscle and brain tissues. Core M3 glycan contains a tandem repeat of ribitol 5-phosphate (Rbo5P) and -alpha3-GlcA-beta3-Xyl- repeating structures. Defects of genes encoding core glycans and modified core M3 glycans are associated with various congenital diseases, such as muscular dystrophies caused by reduced O-mannosylation of alpha-dystroglycan in skeletal muscles [DS:H00120].
Class
Metabolism; Glycan biosynthesis and metabolism
Pathway map
mlk00515  Mannose type O-glycan biosynthesis
mlk00515

Module
mlk_M00872  O-glycan biosynthesis, mannose type (core M3) [PATH:mlk00515]
Other DBs
GO: 0035269
Organism
Mustela lutreola (European mink) [GN:mlk]
Gene
131836826  POMT2; protein O-mannosyl-transferase 2 [KO:K00728] [EC:2.4.1.109]
131812271  POMT1; protein O-mannosyl-transferase 1 isoform X1 [KO:K00728] [EC:2.4.1.109]
131809323  POMGNT1; protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 [KO:K09666] [EC:2.4.1.-]
131812060  B4GALT1; beta-1,4-galactosyltransferase 1 [KO:K07966] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
131808818  B4GALT2; beta-1,4-galactosyltransferase 2 isoform X1 [KO:K07967] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
131814718  B4GALT3; beta-1,4-galactosyltransferase 3 [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
131817561  beta-1,4-galactosyltransferase 2-like isoform X1 [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
131809656  ST3GAL3; CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase isoform X1 [KO:K00781] [EC:2.4.3.6]
131838906  B3GAT1; galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X1 [KO:K00735] [EC:2.4.1.135]
131834163  B3GAT2; galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2 [KO:K10157] [EC:2.4.1.135]
131808492  CHST10; carbohydrate sulfotransferase 10 [KO:K09674] [EC:2.8.2.-]
131833592  FUT9; 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9 [KO:K03663] [EC:2.4.1.152]
131839104  FUT4; alpha-(1,3)-fucosyltransferase 4 [KO:K07632] [EC:2.4.1.-]
131817011  MGAT5B; alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B [KO:K09661] [EC:2.4.1.-]
131824446  POMGNT2; protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [KO:K18207] [EC:2.4.1.312]
131829053  B3GALNT2; UDP-GalNAc:beta-1, 3-N-acetylgalactosaminyltransferase 2 isoform X1 [KO:K09654] [EC:2.4.1.313]
131820447  POMK; protein O-mannose kinase [KO:K17547] [EC:2.7.1.183]
131829457  CRPPA; D-ribitol-5-phosphate cytidylyltransferase [KO:K21031] [EC:2.7.7.40]
131812432  FKTN; ribitol-5-phosphate transferase FKTN isoform X1 [KO:K19872] [EC:2.7.8.-]
131818459  FKRP; ribitol 5-phosphate transferase FKRP [KO:K19873] [EC:2.7.8.-]
131838501  RXYLT1; ribitol-5-phosphate xylosyltransferase 1 [KO:K21052] [EC:2.4.2.61]
131815963  B4GAT1; beta-1,4-glucuronyltransferase 1 [KO:K21032] [EC:2.4.1.-]
131839395  LARGE1; xylosyl- and glucuronyltransferase LARGE1 isoform X1 [KO:K09668] [EC:2.4.2.- 2.4.1.-]
131811801  LARGE2; xylosyl- and glucuronyltransferase LARGE2 isoform X1 [KO:K09668] [EC:2.4.2.- 2.4.1.-]
Compound
C00063  CTP
C00789  CDP-ribitol
C01068  D-Ribitol 5-phosphate
C02189  [Protein]-L-serine
G10617  Dolichyl phosphate D-mannose
G13026   
G13027   
G13028   
G13082   
G13083   
G13084  O-Mannose core M1
G13085   
G13086  O-Mannose core M2
G13087   
G13088   
G13089   
G13090   
G13091  O-mannose core M3
G13092  Phospho-core M3
G13093   
G13094   
G13095   
G13096   
G13097   
G13098   
G13099   
G13100   
Reference
  Authors
Praissman JL, Wells L
  Title
Mammalian O-mannosylation pathway: glycan structures, enzymes, and protein substrates.
  Journal
Biochemistry 53:3066-78 (2014)
DOI:10.1021/bi500153y
Reference
  Authors
Stalnaker SH, Stuart R, Wells L
  Title
Mammalian O-mannosylation: unsolved questions of structure/function.
  Journal
Curr Opin Struct Biol 21:603-9 (2011)
DOI:10.1016/j.sbi.2011.09.001
Reference
  Authors
Kanagawa M, Kobayashi K, Tajiri M, Manya H, Kuga A, Yamaguchi Y, Akasaka-Manya K, Furukawa J, Mizuno M, Kawakami H, Shinohara Y, Wada Y, Endo T, Toda T
  Title
Identification of a Post-translational Modification with Ribitol-Phosphate and Its Defect in Muscular Dystrophy.
  Journal
Cell Rep 14:2209-23 (2016)
DOI:10.1016/j.celrep.2016.02.017
Reference
  Authors
Manya H, Yamaguchi Y, Kanagawa M, Kobayashi K, Tajiri M, Akasaka-Manya K, Kawakami H, Mizuno M, Wada Y, Toda T, Endo T
  Title
The Muscular Dystrophy Gene TMEM5 Encodes a Ribitol beta1,4-Xylosyltransferase Required for the Functional Glycosylation of Dystroglycan.
  Journal
J Biol Chem 291:24618-24627 (2016)
DOI:10.1074/jbc.M116.751917
Related
pathway
mlk00510  N-Glycan biosynthesis
KO pathway
ko00515   
LinkDB

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