KEGG   PATHWAY: mpuf00020
Entry
mpuf00020                   Pathway                                
Name
Citrate cycle (TCA cycle) - Mustela putorius furo (domestic ferret)
Description
The citrate cycle (TCA cycle, Krebs cycle) is an important aerobic pathway for the final steps of the oxidation of carbohydrates and fatty acids. The cycle starts with acetyl-CoA, the activated form of acetate, derived from glycolysis and pyruvate oxidation for carbohydrates and from beta oxidation of fatty acids. The two-carbon acetyl group in acetyl-CoA is transferred to the four-carbon compound of oxaloacetate to form the six-carbon compound of citrate. In a series of reactions two carbons in citrate are oxidized to CO2 and the reaction pathway supplies NADH for use in the oxidative phosphorylation and other metabolic processes. The pathway also supplies important precursor metabolites including 2-oxoglutarate. At the end of the cycle the remaining four-carbon part is transformed back to oxaloacetate. According to the genome sequence data, many organisms seem to lack genes for the full cycle [MD:M00009], but contain genes for specific segments [MD:M00010 M00011].
Class
Metabolism; Carbohydrate metabolism
Pathway map
mpuf00020  Citrate cycle (TCA cycle)
mpuf00020

Module
mpuf_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:mpuf00020]
mpuf_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:mpuf00020]
mpuf_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:mpuf00020]
mpuf_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:mpuf00020]
mpuf_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:mpuf00020]
Other DBs
GO: 0006099
Organism
Mustela putorius furo (domestic ferret) [GN:mpuf]
Gene
101674447  MDH2; malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
101674496  [KO:K00030] [EC:1.1.1.41]
101674988  ACLY; ATP-citrate synthase [KO:K01648] [EC:2.3.3.8]
101675188  IDH3B; isocitrate dehydrogenase [NAD] subunit beta, mitochondrial isoform X1 [KO:K00030] [EC:1.1.1.41]
101675639  DLD; dihydrolipoyl dehydrogenase, mitochondrial [KO:K00382] [EC:1.8.1.4]
101676248  MDH1; malate dehydrogenase, cytoplasmic [KO:K00025] [EC:1.1.1.37]
101677604  SUCLG2; succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial isoform X2 [KO:K01900] [EC:6.2.1.4 6.2.1.5]
101678731  SDHA; succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [KO:K00234] [EC:1.3.5.1]
101679571  PDHA2; pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial [KO:K00161] [EC:1.2.4.1]
101679614  OGDHL; 2-oxoglutarate dehydrogenase-like, mitochondrial [KO:K00164] [EC:1.2.4.2]
101679876  IDH3G; isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial isoform X1 [KO:K00030] [EC:1.1.1.41]
101680264  SDHC; succinate dehydrogenase cytochrome b560 subunit, mitochondrial [KO:K00236]
101681001  IDH2; isocitrate dehydrogenase [NADP], mitochondrial [KO:K00031] [EC:1.1.1.42]
101682178  ACO2; aconitate hydratase, mitochondrial [KO:K01681] [EC:4.2.1.3]
101682324  OGDH; 2-oxoglutarate dehydrogenase, mitochondrial isoform X2 [KO:K00164] [EC:1.2.4.2]
101682823  IDH1; isocitrate dehydrogenase [NADP] cytoplasmic [KO:K00031] [EC:1.1.1.42]
101683781  FH; fumarate hydratase, mitochondrial [KO:K01679] [EC:4.2.1.2]
101683794  PC; pyruvate carboxylase, mitochondrial isoform X1 [KO:K01958] [EC:6.4.1.1]
101685355  [KO:K00236]
101686677  PDHB; pyruvate dehydrogenase E1 component subunit beta, mitochondrial [KO:K00162] [EC:1.2.4.1]
101686728  CS; citrate synthase, mitochondrial [KO:K01647] [EC:2.3.3.1]
101687052  SUCLA2; succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial isoform X1 [KO:K01900] [EC:6.2.1.4 6.2.1.5]
101687151  PDHA1; pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial [KO:K00161] [EC:1.2.4.1]
101687534  PCK1; phosphoenolpyruvate carboxykinase, cytosolic [GTP] [KO:K01596] [EC:4.1.1.32]
101687851  [KO:K00030] [EC:1.1.1.41]
101690388  DLST; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial [KO:K00658] [EC:2.3.1.61]
101691360  ACO1; cytoplasmic aconitate hydratase [KO:K01681] [EC:4.2.1.3]
101692033  DLAT; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial [KO:K00627] [EC:2.3.1.12]
101692756  SUCLG1; succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial [KO:K01899] [EC:6.2.1.4 6.2.1.5]
101692858  SDHB; succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial [KO:K00235] [EC:1.3.5.1]
101693939  PCK2; phosphoenolpyruvate carboxykinase [GTP], mitochondrial [KO:K01596] [EC:4.1.1.32]
101694292  SDHD; succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial [KO:K00237]
106004696  [KO:K00030] [EC:1.1.1.41]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00026  2-Oxoglutarate
C00036  Oxaloacetate
C00042  Succinate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00091  Succinyl-CoA
C00122  Fumarate
C00149  (S)-Malate
C00158  Citrate
C00311  Isocitrate
C00417  cis-Aconitate
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C05379  Oxalosuccinate
C05381  3-Carboxy-1-hydroxypropyl-ThPP
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16254  [Dihydrolipoyllysine-residue succinyltransferase] S-succinyldihydrolipoyllysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
mpuf00010  Glycolysis / Gluconeogenesis
mpuf00053  Ascorbate and aldarate metabolism
mpuf00061  Fatty acid biosynthesis
mpuf00062  Fatty acid elongation
mpuf00071  Fatty acid degradation
mpuf00190  Oxidative phosphorylation
mpuf00220  Arginine biosynthesis
mpuf00250  Alanine, aspartate and glutamate metabolism
mpuf00280  Valine, leucine and isoleucine degradation
mpuf00350  Tyrosine metabolism
mpuf00470  D-Amino acid metabolism
mpuf00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00020   

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