KEGG   PATHWAY: mshg00030
Entry
mshg00030                   Pathway                                
Name
Pentose phosphate pathway - Mycobacterium shigaense
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
mshg00030  Pentose phosphate pathway
mshg00030

Module
mshg_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:mshg00030]
mshg_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:mshg00030]
mshg_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:mshg00030]
mshg_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:mshg00030]
Other DBs
GO: 0006098
Organism
Mycobacterium shigaense [GN:mshg]
Gene
MSG_00143  fda; fructose-bisphosphate aldolase class 1 [KO:K01623] [EC:4.1.2.13]
MSG_00578  fba; fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
MSG_00696  deoC; deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
MSG_01436  pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
MSG_01565  pfkA; ATP-dependent 6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
MSG_02087  rpe; ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
MSG_02119  pgl; 6-phosphogluconolactonase [KO:K01057] [EC:3.1.1.31]
MSG_02121  zwf2; glucose-6-phosphate 1-dehydrogenase 2 [KO:K00036] [EC:1.1.1.49 1.1.1.363]
MSG_02122  tal; transaldolase [KO:K00616] [EC:2.2.1.2]
MSG_02123  tkt; transketolase [KO:K00615] [EC:2.2.1.1]
MSG_02614  gnd; 6-phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
MSG_02636  xfp; putative phosphoketolase [KO:K01621] [EC:4.1.2.9 4.1.2.22]
MSG_02762  zwf; glucose-6-phosphate 1-dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
MSG_02806  pfkB; putative ATP-dependent 6-phosphofructokinase isozyme 2 [KO:K16370] [EC:2.7.1.11]
MSG_02921  aroK_2; gluconokinase [KO:K00851] [EC:2.7.1.12]
MSG_03428  rbsK; ribokinase [KO:K00852] [EC:2.7.1.15]
MSG_03469  rpiB; ribose-5-phosphate isomerase B [KO:K01808] [EC:5.3.1.6]
MSG_03899  gnd2; 6-phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
MSG_03900  zwf1; glucose-6-phosphate 1-dehydrogenase 1 [KO:K00036] [EC:1.1.1.49 1.1.1.363]
MSG_03926  glpX; fructose-1,6-bisphosphatase class 2 [KO:K02446] [EC:3.1.3.11]
MSG_03996  prs; ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
MSG_04091  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
mshg00010  Glycolysis / Gluconeogenesis
mshg00040  Pentose and glucuronate interconversions
mshg00052  Galactose metabolism
mshg00230  Purine metabolism
mshg00240  Pyrimidine metabolism
mshg00340  Histidine metabolism
mshg00630  Glyoxylate and dicarboxylate metabolism
mshg00750  Vitamin B6 metabolism
KO pathway
ko00030   

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