KEGG   PATHWAY: mvar00010
Entry
mvar00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Massilia varians
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
mvar00010  Glycolysis / Gluconeogenesis
mvar00010

Module
mvar_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:mvar00010]
mvar_M00002  Glycolysis, core module involving three-carbon compounds [PATH:mvar00010]
mvar_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:mvar00010]
mvar_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:mvar00010]
Other DBs
GO: 0006096 0006094
Organism
Massilia varians [GN:mvar]
Gene
MasN3_00460  pckG; phosphoenolpyruvate carboxykinase [GTP] [KO:K01596] [EC:4.1.1.32]
MasN3_00740  [KO:K00382] [EC:1.8.1.4]
MasN3_04380  [KO:K00845] [EC:2.7.1.2]
MasN3_04650  gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
MasN3_10780  [KO:K15634] [EC:5.4.2.11]
MasN3_11110  adhI; S-(hydroxymethyl)glutathione dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
MasN3_13200  [KO:K00128] [EC:1.2.1.3]
MasN3_13890  hexC; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
MasN3_14060  [KO:K00845] [EC:2.7.1.2]
MasN3_14300  acsA; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
MasN3_14540  galM_1; aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
MasN3_22370  yahK; aldehyde reductase YahK [KO:K13979] [EC:1.1.1.2]
MasN3_27230  odhL_1; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
MasN3_28420  lpdV; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
MasN3_29550  [KO:K00845] [EC:2.7.1.2]
MasN3_30000  galM_2; aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
MasN3_30190  [KO:K21071] [EC:2.7.1.11 2.7.1.90]
MasN3_30880  [KO:K13953] [EC:1.1.1.1]
MasN3_30940  ppsA_1; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
MasN3_31030  ppsA_2; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
MasN3_33040  [KO:K01895] [EC:6.2.1.1]
MasN3_35860  tpiA; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
MasN3_37500  odhL_2; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
MasN3_39280  eno; enolase [KO:K01689] [EC:4.2.1.11]
MasN3_40170  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
MasN3_42200  [KO:K00121] [EC:1.1.1.284 1.1.1.1]
MasN3_42440  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
MasN3_42450  pdhB; acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
MasN3_42460  aceE; pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
MasN3_42780  glk_1; bifunctional protein glk [KO:K00845] [EC:2.7.1.2]
MasN3_42910  glk_2; bifunctional protein glk [KO:K00845] [EC:2.7.1.2]
MasN3_42940  pgm_1; alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
MasN3_43370  fbp_2; fructose-1,6-bisphosphatase class 1 [KO:K03841] [EC:3.1.3.11]
MasN3_44850  pgm_2; phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
MasN3_46820  [KO:K01785] [EC:5.1.3.3]
MasN3_46960  cbbA; fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
MasN3_46970  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
MasN3_46980  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
mvar00020  Citrate cycle (TCA cycle)
mvar00030  Pentose phosphate pathway
mvar00500  Starch and sucrose metabolism
mvar00620  Pyruvate metabolism
mvar00640  Propanoate metabolism
mvar00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

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