KEGG   PATHWAY: nak00010
Entry
nak00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Nakamurella antarctica
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
nak00010  Glycolysis / Gluconeogenesis
nak00010

Module
nak_M00002  Glycolysis, core module involving three-carbon compounds [PATH:nak00010]
nak_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:nak00010]
Other DBs
GO: 0006096 0006094
Organism
Nakamurella antarctica [GN:nak]
Gene
EH165_06155  ROK family protein [KO:K25026] [EC:2.7.1.2]
EH165_09250  pyrophosphate--fructose-6-phosphate 1-phosphotransferase [KO:K00895] [EC:2.7.1.90]
EH165_14030  class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
EH165_07140  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
EH165_07150  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
EH165_07145  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
EH165_13380  phosphoglyceromutase [KO:K01834] [EC:5.4.2.11]
EH165_13510  histidine phosphatase family protein [KO:K15634] [EC:5.4.2.11]
EH165_03530  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
EH165_06685  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
EH165_08570  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
EH165_12340  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
EH165_12335  alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
EH165_12330  2-oxo acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
EH165_09125  sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase [KO:K00627] [EC:2.3.1.12]
EH165_09120  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
EH165_02510  zinc-dependent alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
EH165_08790  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
EH165_10955  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
EH165_09410  aldehyde dehydrogenase family protein [KO:K00138] [EC:1.2.1.-]
EH165_02100  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
EH165_02990  aldose epimerase [KO:K01785] [EC:5.1.3.3]
EH165_10445  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
EH165_13750  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
EH165_14375  phosphoenolpyruvate carboxykinase (GTP) [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
nak00020  Citrate cycle (TCA cycle)
nak00030  Pentose phosphate pathway
nak00500  Starch and sucrose metabolism
nak00620  Pyruvate metabolism
nak00640  Propanoate metabolism
nak00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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