KEGG   PATHWAY: nen00240
Entry
nen00240                    Pathway                                
Name
Pyrimidine metabolism - Neorhizobium sp. NCHU2750
Class
Metabolism; Nucleotide metabolism
Pathway map
nen00240  Pyrimidine metabolism
nen00240

Module
nen_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:nen00240]
nen_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:nen00240]
Other DBs
GO: 0006220 0006213
Organism
Neorhizobium sp. NCHU2750 [GN:nen]
Gene
NCHU2750_22350  carB; carbamoylphosphate synthase large subunit [KO:K01955] [EC:6.3.5.5]
NCHU2750_22290  carA; carbamoylphosphate synthase small subunit [KO:K01956] [EC:6.3.5.5]
NCHU2750_13180  pyrB; aspartate carbamoyl transferase catalytic subunit [KO:K00609] [EC:2.1.3.2]
NCHU2750_00770  pyrC; dihydroorotase [KO:K01465] [EC:3.5.2.3]
NCHU2750_13170  pyrC; dihydroorotase [KO:K01465] [EC:3.5.2.3]
NCHU2750_01260  pyrD; dihydroorotate dehydrogenase [KO:K00254] [EC:1.3.5.2]
NCHU2750_00790  pyrE; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
NCHU2750_40800  pyrF; orotidine 5''-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
NCHU2750_20150  pyrH; uridylate kinase [KO:K09903] [EC:2.7.4.22]
NCHU2750_10370  ndk; phosphodiesterase [KO:K00940] [EC:2.7.4.6]
NCHU2750_19710  mazG; nucleoside triphosphate hydrolase [KO:K04765] [EC:3.6.1.9]
NCHU2750_02170  maf; septum formation protein [KO:K06287] [EC:3.6.1.-]
NCHU2750_37250  maf; septum formation protein [KO:K06287] [EC:3.6.1.-]
NCHU2750_19020  pyrG; CTP synthase [KO:K01937] [EC:6.3.4.2]
NCHU2750_38650  cmk; cytidylate kinase [KO:K00945] [EC:2.7.4.25]
NCHU2750_27610  5'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
NCHU2750_21400  surE; stationary phase survival protein [KO:K03787] [EC:3.1.3.5 3.1.3.6]
NCHU2750_39770  upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
NCHU2750_14420  cpdB; 2'', 3''-cyclic nucleotide 2''-phosphodiesterase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
NCHU2750_27030  metallophosphoesterase [KO:K09769] [EC:3.1.4.16]
NCHU2750_47730  psuG; pseudouridine-5''-phosphate glycosidase [KO:K16329] [EC:4.2.1.70]
NCHU2750_39720  cdd; cytidine deaminase [KO:K01489] [EC:3.5.4.5]
NCHU2750_26270  codA; cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
NCHU2750_45950  codA; cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
NCHU2750_47090  codA; cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
NCHU2750_01080  dcd; 2''-deoxycytidine 5''-triphosphate deaminase [KO:K01494] [EC:3.5.4.13]
NCHU2750_14190  ribonucleotide-diphosphate reductase alpha subunit [KO:K00525] [EC:1.17.4.1]
NCHU2750_09350  hydrolase [KO:K06952] [EC:3.1.3.89]
NCHU2750_17820  tmk; thymydilate kinase [KO:K00943] [EC:2.7.4.9]
NCHU2750_40940  dut; deoxyuridine 5''-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
NCHU2750_39750  deoA; thymidine phosphorylase [KO:K00758] [EC:2.4.2.4]
NCHU2750_23960  tdk; thymidine kinase [KO:K00857] [EC:2.7.1.21]
NCHU2750_20610  thyA; thymidylate synthase [KO:K00560] [EC:2.1.1.45]
NCHU2750_57570  thyA; thymidylate synthase [KO:K00560] [EC:2.1.1.45]
NCHU2750_25260  preT; dihydropyrimidine dehydrogenase [KO:K17722] [EC:1.3.1.1]
NCHU2750_25270  preA; dihydropyrimidine dehydrogenase [KO:K17723] [EC:1.3.1.1]
NCHU2750_25430  dht; dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
NCHU2750_41960  dht; dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
NCHU2750_43490  dht; dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
NCHU2750_45210  amaB; N-carbamoyl-beta-alanine amidohydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
NCHU2750_54190  amaB; N-carbamoyl-beta-alanine amidohydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
NCHU2750_47700  amaB; N-carbamoyl-beta-alanine amidohydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
NCHU2750_32280  hypothetical protein [KO:K06016] [EC:3.5.1.6 3.5.1.87]
NCHU2750_25410  amaB; N-carbamoyl-beta-alanine amidohydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
NCHU2750_43470  amaB; N-carbamoyl-beta-alanine amidohydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
NCHU2750_47470  rutA; pyrimidine monooxygenase [KO:K09018] [EC:1.14.99.46]
NCHU2750_51220  rutF; flavin reductase [KO:K09024] [EC:1.5.1.-]
NCHU2750_46210  rutF; flavin reductase [KO:K09024] [EC:1.5.1.-]
NCHU2750_47430  rutF; flavin reductase [KO:K09024] [EC:1.5.1.-]
NCHU2750_47460  rutB; ureidoacrylate peracid hydrolase [KO:K09020] [EC:3.5.1.110]
NCHU2750_47450  rutC; aminoacrylate peracid reductase [KO:K09021]
NCHU2750_48260  hypothetical protein [KO:K09023] [EC:3.5.1.-]
NCHU2750_47440  rutD; aminoacrylate hydrolase [KO:K09023] [EC:3.5.1.-]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
nen00030  Pentose phosphate pathway
nen00220  Arginine biosynthesis
nen00250  Alanine, aspartate and glutamate metabolism
nen00280  Valine, leucine and isoleucine degradation
nen00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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