KEGG   PATHWAY: ntx00030
Entry
ntx00030                    Pathway                                
Name
Pentose phosphate pathway - Niallia taxi
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ntx00030  Pentose phosphate pathway
ntx00030

Module
ntx_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ntx00030]
ntx_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ntx00030]
ntx_M00345  Formaldehyde assimilation, ribulose monophosphate pathway [PATH:ntx00030]
ntx_M00580  Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:ntx00030]
ntx_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ntx00030]
Other DBs
GO: 0006098
Organism
Niallia taxi [GN:ntx]
Gene
NQZ71_06135  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
NQZ71_05410  zwf; glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
NQZ71_08870  zwf; glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
NQZ71_18555  lactonase family protein [KO:K07404] [EC:3.1.1.31]
NQZ71_05415  gnd; decarboxylating 6-phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
NQZ71_08860  gndA; NADP-dependent phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
NQZ71_17095  gnd; decarboxylating 6-phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
NQZ71_16960  rpe; ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
NQZ71_04960  tkt; transketolase [KO:K00615] [EC:2.2.1.1]
NQZ71_05275  transketolase [KO:K00615] [EC:2.2.1.1]
NQZ71_05280  transketolase family protein [KO:K00615] [EC:2.2.1.1]
NQZ71_13300  tkt; transketolase [KO:K00615] [EC:2.2.1.1]
NQZ71_22860  transketolase family protein [KO:K00615] [EC:2.2.1.1]
NQZ71_22865  transketolase [KO:K00615] [EC:2.2.1.1]
NQZ71_05005  rpiA; ribose-5-phosphate isomerase RpiA [KO:K01807] [EC:5.3.1.6]
NQZ71_03440  rpiB; ribose 5-phosphate isomerase B [KO:K01808] [EC:5.3.1.6]
NQZ71_03765  rpiB; ribose 5-phosphate isomerase B [KO:K01808] [EC:5.3.1.6]
NQZ71_04950  rpiB; ribose 5-phosphate isomerase B [KO:K01808] [EC:5.3.1.6]
NQZ71_05645  hxlA; 3-hexulose-6-phosphate synthase [KO:K08093] [EC:4.1.2.43]
NQZ71_05640  hxlB; 6-phospho-3-hexuloisomerase [KO:K08094] [EC:5.3.1.27]
NQZ71_08160  deoC; deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
NQZ71_22000  rbsK; ribokinase [KO:K00852] [EC:2.7.1.15]
NQZ71_08945  deoB; phosphopentomutase [KO:K01839] [EC:5.4.2.7]
NQZ71_04600  phospho-sugar mutase [KO:K01835] [EC:5.4.2.2]
NQZ71_16500  ribose-phosphate diphosphokinase [KO:K00948] [EC:2.7.6.1]
NQZ71_02025  ribose-phosphate diphosphokinase [KO:K00948] [EC:2.7.6.1]
NQZ71_10500  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
NQZ71_16145  gdh; glucose 1-dehydrogenase [KO:K00034] [EC:1.1.1.47]
NQZ71_17090  gntK; gluconokinase [KO:K25031] [EC:2.7.1.12]
NQZ71_10505  sugar kinase [KO:K00874] [EC:2.7.1.45]
NQZ71_21295  sugar kinase [KO:K00874] [EC:2.7.1.45]
NQZ71_00135  sugar kinase [KO:K00874] [EC:2.7.1.45]
NQZ71_19325  fructose bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
NQZ71_03370  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
NQZ71_04245  class II fructose-bisphosphate aldolase family protein [KO:K01624] [EC:4.1.2.13]
NQZ71_04250  ketose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
NQZ71_07980  fructose-1,6-bisphosphatase [KO:K04041] [EC:3.1.3.11]
NQZ71_03770  ATP-dependent 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
NQZ71_07005  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
ntx00010  Glycolysis / Gluconeogenesis
ntx00040  Pentose and glucuronate interconversions
ntx00052  Galactose metabolism
ntx00230  Purine metabolism
ntx00240  Pyrimidine metabolism
ntx00340  Histidine metabolism
ntx00630  Glyoxylate and dicarboxylate metabolism
ntx00750  Vitamin B6 metabolism
KO pathway
ko00030   
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