KEGG   PATHWAY: aaeg00630
Entry
aaeg00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Achromobacter aegrifaciens
Class
Metabolism; Carbohydrate metabolism
Pathway map
aaeg00630  Glyoxylate and dicarboxylate metabolism
aaeg00630

Module
aaeg_M00012  Glyoxylate cycle [PATH:aaeg00630]
aaeg_M00621  Glycine cleavage system [PATH:aaeg00630]
Other DBs
GO: 0046487 0043648
Organism
Achromobacter aegrifaciens [GN:aaeg]
Gene
RA224_11220  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
RA224_20760  acyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
RA224_24750  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
RA224_24925  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
RA224_31435  malate synthase G [KO:K01638] [EC:2.3.3.9]
RA224_24700  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
RA224_24665  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
RA224_02490  citryl-CoA lyase [KO:K01647] [EC:2.3.3.1]
RA224_05420  citryl-CoA lyase [KO:K01647] [EC:2.3.3.1]
RA224_29910  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
RA224_06065  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
RA224_10905  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
RA224_10980  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
RA224_14600  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
RA224_15020  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
RA224_20815  bktB; beta-ketothiolase BktB [KO:K00626] [EC:2.3.1.9]
RA224_00455  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
RA224_10595  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
RA224_11005  acetyl-CoA C-acyltransferase family protein [KO:K00626] [EC:2.3.1.9]
RA224_24505  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
RA224_25975  SDR family oxidoreductase [KO:K00023] [EC:1.1.1.36]
RA224_04395  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
RA224_30335  cobalamin B12-binding domain-containing protein [KO:K01849] [EC:5.4.99.2]
RA224_30330  methylmalonyl-CoA mutase family protein [KO:K01848] [EC:5.4.99.2]
RA224_23280  FAD-linked oxidase C-terminal domain-containing protein [KO:K00104] [EC:1.1.99.14]
RA224_23275  glcE; glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
RA224_23270  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
RA224_08890  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
RA224_12355  catalase [KO:K03781] [EC:1.11.1.6]
RA224_18245  catalase [KO:K03781] [EC:1.11.1.6]
RA224_27045  catalase [KO:K03781] [EC:1.11.1.6]
RA224_32280  catalase [KO:K03781] [EC:1.11.1.6]
RA224_26320  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
RA224_28635  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
RA224_25145  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
RA224_30420  HAD hydrolase-like protein [KO:K01091] [EC:3.1.3.18]
RA224_01705  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
RA224_15350  aminotransferase class V-fold PLP-dependent enzyme [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
RA224_32070  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
RA224_29045  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
RA224_03830  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
RA224_04550  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
RA224_04540  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
RA224_16110  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
RA224_19735  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
RA224_24600  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
RA224_29500  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
RA224_04545  gcvH; glycine cleavage system protein GcvH [KO:K02437]
RA224_27985  glycerate kinase [KO:K00865] [EC:2.7.1.165]
RA224_27095  fumarate hydratase [KO:K03779] [EC:4.2.1.32]
RA224_27090  fumarate hydratase C-terminal domain-containing protein [KO:K03780] [EC:4.2.1.32]
RA224_22565  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
RA224_06435  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
RA224_27635  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
RA224_06700  formate dehydrogenase subunit delta [KO:K00126] [EC:1.17.1.9]
RA224_01555  fdnG; formate dehydrogenase-N subunit alpha [KO:K00123] [EC:1.17.1.9]
RA224_06710  fdhF; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
RA224_01560  fdxH; formate dehydrogenase subunit beta [KO:K00124]
RA224_06715  NADH-quinone oxidoreductase subunit NuoF [KO:K00124]
RA224_01565  formate dehydrogenase subunit gamma [KO:K00127]
RA224_06720  formate dehydrogenase subunit gamma [KO:K00127]
RA224_02260  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
RA224_06550  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
RA224_23950  kynB; arylformamidase [KO:K07130] [EC:3.5.1.9]
RA224_27725  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
RA224_11895  acetamidase/formamidase family protein [KO:K01455] [EC:3.5.1.49]
RA224_19985  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
aaeg00010  Glycolysis / Gluconeogenesis
aaeg00020  Citrate cycle (TCA cycle)
aaeg00030  Pentose phosphate pathway
aaeg00053  Ascorbate and aldarate metabolism
aaeg00071  Fatty acid degradation
aaeg00230  Purine metabolism
aaeg00250  Alanine, aspartate and glutamate metabolism
aaeg00260  Glycine, serine and threonine metabolism
aaeg00620  Pyruvate metabolism
aaeg00710  Carbon fixation by Calvin cycle
aaeg00750  Vitamin B6 metabolism
aaeg00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

DBGET integrated database retrieval system