KEGG   PATHWAY: aaqu00630
Entry
aaqu00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Alcaligenes aquatilis
Class
Metabolism; Carbohydrate metabolism
Pathway map
aaqu00630  Glyoxylate and dicarboxylate metabolism
aaqu00630

Module
aaqu_M00012  Glyoxylate cycle [PATH:aaqu00630]
Other DBs
GO: 0046487 0043648
Organism
Alcaligenes aquatilis [GN:aaqu]
Gene
D3M96_12630  isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
D3M96_13590  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
D3M96_05300  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
D3M96_00475  malate synthase G [KO:K01638] [EC:2.3.3.9]
D3M96_06445  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
D3M96_06480  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
D3M96_06420  2-methylcitrate synthase [KO:K01659] [EC:2.3.3.5]
D3M96_18610  acnA; aconitate hydratase AcnA [KO:K27802] [EC:4.2.1.3 4.2.1.99]
D3M96_08240  acnA; aconitate hydratase AcnA [KO:K27802] [EC:4.2.1.3 4.2.1.99]
D3M96_06405  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
D3M96_00570  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
D3M96_14880  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
D3M96_19405  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
D3M96_11250  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
D3M96_11255  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
D3M96_14885  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
D3M96_06600  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
D3M96_07035  glcD; glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
D3M96_07040  glcE; glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
D3M96_07045  glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
D3M96_12900  catalase [KO:K03781] [EC:1.11.1.6]
D3M96_19795  catalase [KO:K03781] [EC:1.11.1.6]
D3M96_13325  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
D3M96_10665  D-2-hydroxyacid dehydrogenase [KO:K00018] [EC:1.1.1.29]
D3M96_01225  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
D3M96_13810  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
D3M96_16605  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
D3M96_14935  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
D3M96_14950  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
D3M96_06510  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
D3M96_11140  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
D3M96_11195  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
D3M96_03605  gcvH; glycine cleavage system protein GcvH [KO:K02437]
D3M96_03680  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
D3M96_03675  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
D3M96_03670  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
D3M96_03665  glycerate kinase [KO:K11529] [EC:2.7.1.165]
D3M96_13320  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D3M96_04065  formate dehydrogenase [KO:K00126] [EC:1.17.1.9]
D3M96_04075  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
D3M96_18045  sulfate ABC transporter substrate-binding protein [KO:K00123] [EC:1.17.1.9]
D3M96_18050  fdnG; formate dehydrogenase-N subunit alpha [KO:K00123] [EC:1.17.1.9]
D3M96_04080  NADH-quinone oxidoreductase subunit NuoF [KO:K00124]
D3M96_18055  fdxH; formate dehydrogenase subunit beta [KO:K00124]
D3M96_04085  formate dehydrogenase subunit gamma [KO:K00127]
D3M96_18060  formate dehydrogenase subunit gamma [KO:K00127]
D3M96_18580  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
D3M96_10485  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
D3M96_04520  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
D3M96_10445  acetamidase/formamidase family protein [KO:K01455] [EC:3.5.1.49]
D3M96_18625  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
aaqu00010  Glycolysis / Gluconeogenesis
aaqu00020  Citrate cycle (TCA cycle)
aaqu00030  Pentose phosphate pathway
aaqu00071  Fatty acid degradation
aaqu00230  Purine metabolism
aaqu00250  Alanine, aspartate and glutamate metabolism
aaqu00260  Glycine, serine and threonine metabolism
aaqu00620  Pyruvate metabolism
aaqu00710  Carbon fixation by Calvin cycle
aaqu00750  Vitamin B6 metabolism
aaqu00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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