KEGG   PATHWAY: aara00020
Entry
aara00020                   Pathway                                
Name
Citrate cycle (TCA cycle) - Anopheles arabiensis
Description
The citrate cycle (TCA cycle, Krebs cycle) is an important aerobic pathway for the final steps of the oxidation of carbohydrates and fatty acids. The cycle starts with acetyl-CoA, the activated form of acetate, derived from glycolysis and pyruvate oxidation for carbohydrates and from beta oxidation of fatty acids. The two-carbon acetyl group in acetyl-CoA is transferred to the four-carbon compound of oxaloacetate to form the six-carbon compound of citrate. In a series of reactions two carbons in citrate are oxidized to CO2 and the reaction pathway supplies NADH for use in the oxidative phosphorylation and other metabolic processes. The pathway also supplies important precursor metabolites including 2-oxoglutarate. At the end of the cycle the remaining four-carbon part is transformed back to oxaloacetate. According to the genome sequence data, many organisms seem to lack genes for the full cycle [MD:M00009], but contain genes for specific segments [MD:M00010 M00011].
Class
Metabolism; Carbohydrate metabolism
Pathway map
aara00020  Citrate cycle (TCA cycle)
aara00020

Module
aara_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:aara00020]
aara_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:aara00020]
aara_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:aara00020]
aara_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:aara00020]
Other DBs
GO: 0006099
Organism
Anopheles arabiensis [GN:aara]
Gene
120899661  probable citrate synthase 2, mitochondrial [KO:K01647] [EC:2.3.3.1]
120904258  ATP-citrate synthase isoform X1 [KO:K01648] [EC:2.3.3.8]
120900833  probable aconitate hydratase, mitochondrial [KO:K01681] [EC:4.2.1.3]
120895203  cytoplasmic aconitate hydratase-like [KO:K01681] [EC:4.2.1.3]
120897465  isocitrate dehydrogenase [NADP], mitochondrial-like [KO:K00031] [EC:1.1.1.42]
120900072  isocitrate dehydrogenase [NADP] cytoplasmic-like isoform X1 [KO:K00031] [EC:1.1.1.42]
120907948  isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial isoform X1 [KO:K00030] [EC:1.1.1.41]
120899982  isocitrate dehydrogenase [NAD] subunit beta, mitochondrial [KO:K00030] [EC:1.1.1.41]
120894020  probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial isoform X1 [KO:K00030] [EC:1.1.1.41]
120895189  2-oxoglutarate dehydrogenase, mitochondrial-like isoform X1 [KO:K00164] [EC:1.2.4.2]
120894634  dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial [KO:K00658] [EC:2.3.1.61]
120904676  dihydrolipoyl dehydrogenase, mitochondrial [KO:K00382] [EC:1.8.1.4]
120893419  succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial [KO:K01899] [EC:6.2.1.4 6.2.1.5]
120908404  succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial isoform X1 [KO:K01900] [EC:6.2.1.4 6.2.1.5]
120893815  succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial [KO:K01900] [EC:6.2.1.4 6.2.1.5]
120904569  succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [KO:K00234] [EC:1.3.5.1]
120894132  succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial [KO:K00235] [EC:1.3.5.1]
120905140  succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like [KO:K00236]
120905463  succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial [KO:K00237]
120903214  fumarate hydratase, mitochondrial-like isoform X1 [KO:K01679] [EC:4.2.1.2]
120905161  malate dehydrogenase, cytoplasmic [KO:K00025] [EC:1.1.1.37]
120895411  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
120908892  pyruvate carboxylase, mitochondrial isoform X1 [KO:K01958] [EC:6.4.1.1]
120894556  phosphoenolpyruvate carboxykinase [GTP] [KO:K01596] [EC:4.1.1.32]
120897683  pyruvate dehydrogenase E1 component subunit alpha, mitochondrial-like [KO:K00161] [EC:1.2.4.1]
120895398  pyruvate dehydrogenase E1 component subunit alpha type II, mitochondrial-like isoform X1 [KO:K00161] [EC:1.2.4.1]
120902884  pyruvate dehydrogenase E1 component subunit beta, mitochondrial [KO:K00162] [EC:1.2.4.1]
120903558  dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial isoform X1 [KO:K00627] [EC:2.3.1.12]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00026  2-Oxoglutarate
C00036  Oxaloacetate
C00042  Succinate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00091  Succinyl-CoA
C00122  Fumarate
C00149  (S)-Malate
C00158  Citrate
C00311  Isocitrate
C00417  cis-Aconitate
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C05379  Oxalosuccinate
C05381  3-Carboxy-1-hydroxypropyl-ThPP
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16254  [Dihydrolipoyllysine-residue succinyltransferase] S-succinyldihydrolipoyllysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
aara00010  Glycolysis / Gluconeogenesis
aara00053  Ascorbate and aldarate metabolism
aara00061  Fatty acid biosynthesis
aara00062  Fatty acid elongation
aara00071  Fatty acid degradation
aara00190  Oxidative phosphorylation
aara00220  Arginine biosynthesis
aara00250  Alanine, aspartate and glutamate metabolism
aara00280  Valine, leucine and isoleucine degradation
aara00350  Tyrosine metabolism
aara00470  D-Amino acid metabolism
aara00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00020   
LinkDB

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