KEGG   PATHWAY: aare00630
Entry
aare00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Azospirillum argentinense
Class
Metabolism; Carbohydrate metabolism
Pathway map
aare00630  Glyoxylate and dicarboxylate metabolism
aare00630

Module
aare_M00012  Glyoxylate cycle [PATH:aare00630]
aare_M00621  Glycine cleavage system [PATH:aare00630]
aare_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:aare00630]
Other DBs
GO: 0046487 0043648
Organism
Azospirillum argentinense [GN:aare]
Gene
D3093_10520  isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
D3093_10975  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
D3093_22175  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
D3093_25775  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
D3093_07855  malate synthase A [KO:K01638] [EC:2.3.3.9]
D3093_13510  malate synthase G [KO:K01638] [EC:2.3.3.9]
D3093_11490  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
D3093_32190  citryl-CoA lyase [KO:K01647] [EC:2.3.3.1]
D3093_01340  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
D3093_26065  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
D3093_24085  2-methylcitrate synthase [KO:K01659] [EC:2.3.3.5]
D3093_08100  acnA; aconitate hydratase AcnA [KO:K27802] [EC:4.2.1.3 4.2.1.99]
D3093_18875  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
D3093_32030  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
D3093_25825  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
D3093_27070  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
D3093_26440  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
D3093_27075  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
D3093_13175  (R)-hydratase [KO:K17865] [EC:4.2.1.55]
D3093_01175  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
D3093_29555  acyl-CoA dehydrogenase [KO:K14448] [EC:1.3.8.12]
D3093_17875  accC; acetyl-CoA carboxylase biotin carboxylase subunit [KO:K01965] [EC:6.4.1.3]
D3093_17880  acyl-CoA carboxylase subunit beta [KO:K01966] [EC:6.4.1.3 2.1.3.15]
D3093_17865  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
D3093_24040  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
D3093_24045  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
D3093_13800  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
D3093_13805  FAD-binding protein [KO:K11472] [EC:1.1.99.14]
D3093_13810  glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
D3093_10615  catalase [KO:K03781] [EC:1.11.1.6]
D3093_27875  catalase [KO:K03781] [EC:1.11.1.6]
D3093_09465  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
D3093_07300  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
D3093_00840  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
D3093_03610  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
D3093_16410  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
D3093_28870  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
D3093_01015  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
D3093_02430  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
D3093_03275  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
D3093_04595  aminomethyl-transferring glycine dehydrogenase subunit GcvPA [KO:K00282] [EC:1.4.4.2]
D3093_04590  glycine dehydrogenase subunit 2 [KO:K00283] [EC:1.4.4.2]
D3093_04605  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
D3093_07135  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
D3093_16345  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
D3093_04600  gcvH; glycine cleavage system protein GcvH [KO:K02437]
D3093_01915  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
D3093_01910  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
D3093_01905  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
D3093_01900  glycerate kinase [KO:K11529] [EC:2.7.1.165]
D3093_29680  eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
D3093_16925  formate dehydrogenase [KO:K00126] [EC:1.17.1.9]
D3093_13335  twin-arginine translocation signal domain-containing protein [KO:K00123] [EC:1.17.1.9]
D3093_16915  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
D3093_20620  twin-arginine translocation signal domain-containing protein [KO:K00123] [EC:1.17.1.9]
D3093_20930  fdnG; formate dehydrogenase-N subunit alpha [KO:K00123] [EC:1.17.1.9]
D3093_28575  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
D3093_28580  NADH-quinone oxidoreductase subunit F [KO:K22515] [EC:1.17.1.9]
D3093_13340  4Fe-4S dicluster domain-containing protein [KO:K00124]
D3093_16910  formate dehydrogenase beta subunit [KO:K00124]
D3093_20615  4Fe-4S dicluster domain-containing protein [KO:K00124]
D3093_20935  fdxH; formate dehydrogenase subunit beta [KO:K00124]
D3093_13350  formate dehydrogenase subunit gamma [KO:K00127]
D3093_16905  formate dehydrogenase subunit gamma [KO:K00127]
D3093_20610  formate dehydrogenase subunit gamma [KO:K00127]
D3093_20940  formate dehydrogenase subunit gamma [KO:K00127]
D3093_21350  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
D3093_06970  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
D3093_15750  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
D3093_17465  acetamidase/formamidase family protein [KO:K01455] [EC:3.5.1.49]
D3093_02065  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
D3093_23360  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
D3093_01860  oxalyl-CoA decarboxylase [KO:K01577] [EC:4.1.1.8]
D3093_28585  oxalyl-CoA decarboxylase [KO:K01577] [EC:4.1.1.8]
D3093_01865  frc; formyl-CoA transferase [KO:K07749] [EC:2.8.3.16]
D3093_28550  frc; formyl-CoA transferase [KO:K07749] [EC:2.8.3.16]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
aare00010  Glycolysis / Gluconeogenesis
aare00020  Citrate cycle (TCA cycle)
aare00030  Pentose phosphate pathway
aare00053  Ascorbate and aldarate metabolism
aare00071  Fatty acid degradation
aare00230  Purine metabolism
aare00250  Alanine, aspartate and glutamate metabolism
aare00260  Glycine, serine and threonine metabolism
aare00620  Pyruvate metabolism
aare00710  Carbon fixation by Calvin cycle
aare00750  Vitamin B6 metabolism
aare00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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